Gene Ava_C0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0123 
Symbol 
ID3677831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp151142 
End bp152128 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content37% 
IMG OID637715206 
ProductParB family protein 
Protein accessionYP_320400 
Protein GI75812783 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA AACGCGAACT AGAAAAACTA ACCGGACTGG ATAATTTATT TGGAGATGAC 
GAAGAAAAAT CTTTATCCGA TTCCACTTTA CCCTTATCTC AAATTATCCT TCCGCCGAGT
CAGCCTCGTC GTTATTTTGA CCCTGTAAAA CTCAAATCAC TCGCTGACAG TATCAAGGAA
GTAGGGTTAC TAGAACCCAT TGTCGTTAGA AAGATTCAGG AAGACAAGTA CGAGATGGTC
GCTGGTGAAC GCCGTCTCAA AGCTTGTGAA ATAGCAAAAC TTGAGGCAAT ACCCGTAGTC
ATTATTGAGT GCGACGAGAA AAAAGCTCGT AAACTACGCT TAGTTGAAAA CCTCCAAAGG
GAAGACCTCA ATGCTTACGA GGAAACTATC GGAATTCTCG AATTACTAGC TGAAGAACTC
GATATTGACC AAGAGACAGT GGTCAAACTG CTCTATGACA TGAATAATGA AAGCAAAGGT
AATTCTAACC ATAACGTTAT GGTTAGTGAA GAAGGACGAA TCATACAAGA TGTATTCTCG
AAGTTAGGAA AAATTACTTG GCAGTCATTT GTAGCTAATC GTCTTCCTTT ACTCAAACTC
CATTTGGATA TCCAAACTGC ATTGCAAAAA GGCGAAATTG AATACACAAA AGCTAAGGAA
ATCAACCGGA TAAAAAATGA TGATGAAAGA CAGAAAGTTT TAAATAAAGC GATCGCAGAA
GGTTTATCAC TATCTGAAAT TAGGATTCTA GTAGTAAATA TTCTTCAGCA ACAGTCAGAA
AATAAGCCAT CATCTCATAA CCAAGAGCAA AAAGAAAAAG CTGACAAAAT ATACAAAGCA
CTTAGAAAAA GTAAAATTTG GAATGATGAG AAAAAGCTAA AAAAAATTAA TAAGCTTTTT
GCTCAAATTG AAGCACTTCT AGAAGAAGAA AACAAAGATG ATCCTTCTTT ACAGCAAGGT
AGTCTAGTCT CGGAGAACTC TTTGTAA
 
Protein sequence
MSQKRELEKL TGLDNLFGDD EEKSLSDSTL PLSQIILPPS QPRRYFDPVK LKSLADSIKE 
VGLLEPIVVR KIQEDKYEMV AGERRLKACE IAKLEAIPVV IIECDEKKAR KLRLVENLQR
EDLNAYEETI GILELLAEEL DIDQETVVKL LYDMNNESKG NSNHNVMVSE EGRIIQDVFS
KLGKITWQSF VANRLPLLKL HLDIQTALQK GEIEYTKAKE INRIKNDDER QKVLNKAIAE
GLSLSEIRIL VVNILQQQSE NKPSSHNQEQ KEKADKIYKA LRKSKIWNDE KKLKKINKLF
AQIEALLEEE NKDDPSLQQG SLVSENSL