Gene Ava_C0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0106 
Symbol 
ID3678081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp126992 
End bp127657 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content48% 
IMG OID637715189 
Productisochorismatase hydrolase 
Protein accessionYP_320383 
Protein GI75812766 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAA ATCCAAAAAT CGGCTTAGAA GGACTGCTTC GTCCAGAAGA TAGCATCCTG 
GTACTGATTG ACCACCAGCC TTATCAGTTC ACCAACTTGA ACAGCCATGA ACCCACGATG
ATCATTAACA ATGTGATTGG TCTTGCTAAA TCGGCAAAAG TGTTTAACGT ACCCACAATC
CTGACCACAG TCATTGAAGA GAGAGGGGGT TACATCATCA AGGGACTACA GGATGTTTTT
CCCGATCAAA AACCGATCAA CCGCACTTTC ATCAATACTT GGGAAGATCC AAACGTTACA
GATGTAGTGA AGAAAAGCGG CCGCAAGCAA CTTATACTTG CTGCGCTTTG GACCGAGATA
TGTCTCGCAA TGCCAGCAAT CCAGGCGCTG GGTGAAGGTT ATGAAGTATT CATCGTTACC
GATGCTTCGG GCGGTGTTAG TGCGGAAGCT CATGACATGG CGGTTCGCCG AATGGTTCAG
GCTGGTGCAG TTCCAATCAA CTGGATGGCT GTACTTGCTG AATGGCAACG TGACTGGGCA
CGCACAGAAA CATCTGCGGG TGTATCAGAG ATTCTTCTTG AGCATGGCGG TGCTAGTGCA
GTGGCCCTTG CATGGGAACT TCAGATCCTG GCAACAACCC CTCCAGCGAC CTCAGGTGGA
CATTAA
 
Protein sequence
MSKNPKIGLE GLLRPEDSIL VLIDHQPYQF TNLNSHEPTM IINNVIGLAK SAKVFNVPTI 
LTTVIEERGG YIIKGLQDVF PDQKPINRTF INTWEDPNVT DVVKKSGRKQ LILAALWTEI
CLAMPAIQAL GEGYEVFIVT DASGGVSAEA HDMAVRRMVQ AGAVPINWMA VLAEWQRDWA
RTETSAGVSE ILLEHGGASA VALAWELQIL ATTPPATSGG H