| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0101 |
|---|
| Symbol | |
|---|
| ID | 3678056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007412 |
|---|
| Strand | - |
|---|
| Start bp | 123098 |
|---|
| End bp | 124039 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637715185 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_320379 |
|---|
| Protein GI | 75812762 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.170875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTTT CTAATCAAAG TACTTCCATT GACAGCGTTT GGCCCAGTTT GCCCTTAGCA
GCTTGGCAGG ATACCTATGC AACTCTCCAT TTATGGACGC AAGTCATCGG TAAAATCCGG
TTGGCACTGG CACCTAAACT TAATCACTGG TGGCAATCTA CTCTTTATGT CACACCGCGT
GGACTAACAA CCGCTTCAAT CCCTTGCGGA ACTCGTAACT TTCAAATTAG CTTTGATTTT
CTCGACCATC AACTACAAAT CGACACTAGC GACGGCATTA CTAAAAGAAT TGCACTGGCT
CCTCGCTCTG TGGCAGATTT TTACCAAATG GTGCTAACTA CATTGAGCGA CATCGGCATC
GAAGTCCGAA TCTGGACGAT GCCGCAAGAA GTGTCAGAAC CCATCCCGTT CGATCAAGAC
TATCAACACG CAGCTTACGA TCCGGAGTAT GCACAACGGT TTTGGCGAAT TCTTGTGCAA
GTCGATCGCA TCATGACCTT ATTCCGTTCA CAGTTTATTG GTAAATCCAG CCCTGTACAT
TTTTTTTGGG GCAGCTTTGA TCTTGCTGTG ACTCGTTTCT CTGGTCGTCG TGCGCCAGAA
CACCCAGGAG GAGTTCCGAA TATGGCAGAT TGGGTTACGC GCGAAGCCTA TTCACACGAA
GTCAGTAGCT GTGGTTTTTG GCCAGGGGGT GGGTCAGTGG TAGAGCCTGT TTTTTACGCT
TACGCTTATC CTGCGCCGGA AGGGTTTCGA GATTACCCAA TCCAACCCAG AGAAGCTTTT
TACAGCTCAC AAATGCAAGA GTTTATCCTA CCCTATGAAG CCGTGAGACA AGCTGACGAT
CCAGATGCAA TGCTCCTTGC CTTTTTCCAA AGCACCTATG AAGCAGCAGC CAACTTAGGA
CATTGGGATC GAGTAGTCCT GGAGCGTTCC CCAACCGTGT AA
|
|---|
| Protein sequence | MAVSNQSTSI DSVWPSLPLA AWQDTYATLH LWTQVIGKIR LALAPKLNHW WQSTLYVTPR
GLTTASIPCG TRNFQISFDF LDHQLQIDTS DGITKRIALA PRSVADFYQM VLTTLSDIGI
EVRIWTMPQE VSEPIPFDQD YQHAAYDPEY AQRFWRILVQ VDRIMTLFRS QFIGKSSPVH
FFWGSFDLAV TRFSGRRAPE HPGGVPNMAD WVTREAYSHE VSSCGFWPGG GSVVEPVFYA
YAYPAPEGFR DYPIQPREAF YSSQMQEFIL PYEAVRQADD PDAMLLAFFQ STYEAAANLG
HWDRVVLERS PTV
|
|---|
| |