Gene Ava_C0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0099 
Symbol 
ID3678054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp120969 
End bp121928 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content57% 
IMG OID637715183 
Productabortive infection protein 
Protein accessionYP_320377 
Protein GI75812760 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0139608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCA AAGCAATCAC AGGACATCAG AAAATCGGAA CGGAAGCGAA AGATTCAACT 
TACGTGGAGG CTGCCGGGTG GGGGAAGTAT CGGTGGTGGC GGTATGTTCT GGGGTTGATG
ATCATCCTCT TTGCATGGAT GGTCGTCGGT AGTAGTGCCA GCGTACTCGT CGCGTTCGCG
CTCGGCGGAC AGGCAGACCC CTCAGTGCTC AGTCCCGTGG AATACTACCT GTTTGTCATG
ACGAGTTTCT TGTTCTTCTT CGTGGGAGTC CTTATCGCTG TCTCCCTCGT CCACCGCCGC
CACCCCCGAA CACTCGTCAC GGTGCAGGAG CGGATAAACT GGCATCGGGT CGGTCATGGA
TTCGTGGCGT GGTTCGTGCC GTACTGCCTG ATCGGTGGGC TGGGGCAGTA TCTGTTTTAC
CCGGATACCT TCTCCTTTAA CTCCGACCTC TTAACCCTCG CACTCTTCGT GCCGCTGGCG
CTGGTTCTTA CCGCGATTCA GACGACCACT GAGGAGCTTT TCTTTCGCGG ATACGTTGTG
CAGGGTGCGA GCCTCATCTG GAGCAACCGC GTCTTTCTGG CGATCGTGCC AGCCGTGATA
TTCACCCTGC CGCACCTCCT TAACCCGGAG GTGTCCGCAG GCGGCTGGCT CACGGTCTTT
TCCAACTACT TCTTCGTTCC GGGTCTGGTG TGGACTGTGG TCTCATTGAT TGACGGCACC
ACCGAACTCG CCATCGGCGT ACACTTCGCG AACAACATCG GCGGGGCACT CCTGTTCAAC
ATCACTGGAA GTGCCTTGCC CTCACCCGCT CTGTTCACAA TCAGCGAGTA TCACGCGACC
TACGGGGCAC TAGCGGTGCT GGTTGCAGTA CCCGTGTTTC TGGCGATCGC CTACAAGGTG
TTCAAACGCG ACGGGGTATC CAAACTCGTT TCCCAGAGCG ATCGGAGTGG TCGTTGGTGA
 
Protein sequence
MRIKAITGHQ KIGTEAKDST YVEAAGWGKY RWWRYVLGLM IILFAWMVVG SSASVLVAFA 
LGGQADPSVL SPVEYYLFVM TSFLFFFVGV LIAVSLVHRR HPRTLVTVQE RINWHRVGHG
FVAWFVPYCL IGGLGQYLFY PDTFSFNSDL LTLALFVPLA LVLTAIQTTT EELFFRGYVV
QGASLIWSNR VFLAIVPAVI FTLPHLLNPE VSAGGWLTVF SNYFFVPGLV WTVVSLIDGT
TELAIGVHFA NNIGGALLFN ITGSALPSPA LFTISEYHAT YGALAVLVAV PVFLAIAYKV
FKRDGVSKLV SQSDRSGRW