Gene Ava_C0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0088 
Symbol 
ID3678043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp114762 
End bp115262 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content38% 
IMG OID637715172 
Productputative transposase 
Protein accessionYP_320366 
Protein GI75812749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.984719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGAG TGACTAAAGT CGAAATAAAA GAGTCAGTCG AAGAGTTACA TGAACTGCTG 
TTAAAACAAA AAACAACATC AAGCCGTGAA AGAATACAAG CTTTGTATTT GCTGAAAATG
GGACAAGTAA AAACAATACA GGATGTAGGT GTTGTTCTGG GCAGAGGAAG AGTAACAGTA
CAGAGATGGT TAAAGGCTTA TACACAATCA GGAATAACAG GCCTGTTAGT AACAAAAAAG
AGTACAGGAC GACCGCCAAT TATAAAGTCA GAAGCTAAAG AGCAACTTTT AAAAGAACTG
GAACAACCAG AGGGATTTAA AAGTTATGAA GAAATCCGAA CATGGCTAAA AGCAGTGGAG
GGAATAGAAG CATCATATAA AGTAGTACAT GATACAGTTC GTTATCGGAT GAAAGCGAAG
TTAAAAGTAC CGAGAGCAGT AGGGATAAAA CATAACTCCG AAGCAGAATC AGAATTTAAA
AAAAACTGCC ACAATACCTA G
 
Protein sequence
MAGVTKVEIK ESVEELHELL LKQKTTSSRE RIQALYLLKM GQVKTIQDVG VVLGRGRVTV 
QRWLKAYTQS GITGLLVTKK STGRPPIIKS EAKEQLLKEL EQPEGFKSYE EIRTWLKAVE
GIEASYKVVH DTVRYRMKAK LKVPRAVGIK HNSEAESEFK KNCHNT