Gene Ava_C0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0082 
Symbol 
ID3677834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp109791 
End bp110498 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content37% 
IMG OID637715166 
Producthypothetical protein 
Protein accessionYP_320360 
Protein GI75812743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA AATCCTCTTC TCGCAAGCCC AGGCTTAATA AAAAGCAAAG GGCTTGGGTA 
AACTCATTCC TTTCGTCTCA TCCTAATGCC AGAGTTAGAA CTATCTACGA ATTGGATGGC
GATCGCGTAG TTCAAATTGA GTGGTGGGAA AACACAAACC CAATAATATT AGACCCAAAA
ACTTACATCC AAGGAATTAT CAGCTACAAT ATGTGGGTTA AACTAAGAAA GTCTGGCGAC
CCCAGGAAAA CAGCTGAGTT TTCTTATCGC ATTACTCCAC CAGAAAAACG AAGCGCATCA
TGGCATTTAA CAGGTCAACT CTCTCTAGAA CTCCCCCAAT GTTACGAAGT TCCAGAACCA
AATAACCCAG TTATCATTAA CCCAAAAAGG AGAAATACTA AAACCAAAAA AGTTAAAAAA
TTTCTTCAAT ATACTCTTCC TTTATCAGAG ATTAATGTTC AAATTCATAC TACAAATATA
GAAGATGATG GTGTTACTCT ATGTGGACAA GAAATATTAC TAGAAAACAC ATCACACCTA
AATTTAGGGA GTGATAAAGA CACTAAACTT CCCGAAGCTA TAGTCAAAAT TCTCTCAGAG
AAACAAGCCA GCTTAAAGGA ATGGGAAACA GCTATTACAC TATACGAGGT AGCTGGTTCT
AGTGGAGTAA TAGAGTATCT TCAACAGTTA GATTCTTGGC GCAAATAA
 
Protein sequence
MKNKSSSRKP RLNKKQRAWV NSFLSSHPNA RVRTIYELDG DRVVQIEWWE NTNPIILDPK 
TYIQGIISYN MWVKLRKSGD PRKTAEFSYR ITPPEKRSAS WHLTGQLSLE LPQCYEVPEP
NNPVIINPKR RNTKTKKVKK FLQYTLPLSE INVQIHTTNI EDDGVTLCGQ EILLENTSHL
NLGSDKDTKL PEAIVKILSE KQASLKEWET AITLYEVAGS SGVIEYLQQL DSWRK