Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0082 |
Symbol | |
ID | 3677834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | + |
Start bp | 109791 |
End bp | 110498 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637715166 |
Product | hypothetical protein |
Protein accession | YP_320360 |
Protein GI | 75812743 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAATA AATCCTCTTC TCGCAAGCCC AGGCTTAATA AAAAGCAAAG GGCTTGGGTA AACTCATTCC TTTCGTCTCA TCCTAATGCC AGAGTTAGAA CTATCTACGA ATTGGATGGC GATCGCGTAG TTCAAATTGA GTGGTGGGAA AACACAAACC CAATAATATT AGACCCAAAA ACTTACATCC AAGGAATTAT CAGCTACAAT ATGTGGGTTA AACTAAGAAA GTCTGGCGAC CCCAGGAAAA CAGCTGAGTT TTCTTATCGC ATTACTCCAC CAGAAAAACG AAGCGCATCA TGGCATTTAA CAGGTCAACT CTCTCTAGAA CTCCCCCAAT GTTACGAAGT TCCAGAACCA AATAACCCAG TTATCATTAA CCCAAAAAGG AGAAATACTA AAACCAAAAA AGTTAAAAAA TTTCTTCAAT ATACTCTTCC TTTATCAGAG ATTAATGTTC AAATTCATAC TACAAATATA GAAGATGATG GTGTTACTCT ATGTGGACAA GAAATATTAC TAGAAAACAC ATCACACCTA AATTTAGGGA GTGATAAAGA CACTAAACTT CCCGAAGCTA TAGTCAAAAT TCTCTCAGAG AAACAAGCCA GCTTAAAGGA ATGGGAAACA GCTATTACAC TATACGAGGT AGCTGGTTCT AGTGGAGTAA TAGAGTATCT TCAACAGTTA GATTCTTGGC GCAAATAA
|
Protein sequence | MKNKSSSRKP RLNKKQRAWV NSFLSSHPNA RVRTIYELDG DRVVQIEWWE NTNPIILDPK TYIQGIISYN MWVKLRKSGD PRKTAEFSYR ITPPEKRSAS WHLTGQLSLE LPQCYEVPEP NNPVIINPKR RNTKTKKVKK FLQYTLPLSE INVQIHTTNI EDDGVTLCGQ EILLENTSHL NLGSDKDTKL PEAIVKILSE KQASLKEWET AITLYEVAGS SGVIEYLQQL DSWRK
|
| |