Gene Ava_C0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0081 
Symbol 
ID3677833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp108767 
End bp109702 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content39% 
IMG OID637715165 
ProductDNA polymerase I-like 
Protein accessionYP_320359 
Protein GI75812742 
COG category[L] Replication, recombination and repair 
COG ID[COG0417] DNA polymerase elongation subunit (family B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACT CTATTCCTGG ACTGTATAGA AGGGTTGGAT ATGCAGATAT TAGCTCAATG 
CACCCTTGGG CAATGCTAGA CAAGGGTATT TGCTCAATTA AAGATACAGA ACGTATTGGG
CTAAGTATTC TGCAATATTT GGTGAATGAA AAATTTAGGT TGGAACAACT TGCATCTGCT
GGAGATATTG CTGCTAAGGA AAAAAGAGAA TCAGTCAAGG TTTTAGCTAA CTCCGAGTTT
GGATTCTTCG GCACCTCTGA ACTCGCCTTC AATGATATGG AGGCTGCTGC ATTAGTTACA
GCCTACAGTC GAAAAGTACT CAAGCTAATG ATTGAAATTA TCACTCGGCA CGGTGGTACT
CCTGTGGAAG TTGACACCGA TGGAGTGTTT TTCACACATT CCAACCCAGA AGAGGTACGT
AGTTTACTTC AATCTCAATT GCCTAAAGGG ATAACTGTCA AGCTAGAGTT TATCGCTGAC
GCTATGTTTA TCCCCGAACG GGGAACCAAA AATTACCTTT TATGGCTTCC AGACGGGAAA
ATTATCACTA AAGGCAACTG GCGCAACCGC GATCGCTCTC AACTAGAGAA AGAGTTTTCT
ATTGAGTATT TAACCCTGCT AATTCAAAAT GTATCAGCAG CAGAAGATTA TTATGCACAC
ATCAAATCCC AGATTTTATC AAGGGAATAT CCAAAAGAAA AACTTGCAAT TACACGCAAG
ATTAAAGAGG GCGAAAAAGA AATACTCAAA CTAGGGAAAC CTGGAGATGT AGTCACTTAC
TATTACGGAA TTAGCGGCAT AACCAATATC AGCAGTAATG AGAATTACTC ACGTCAATAC
TATCTTCATC TTATTGAAAA AAGGCGAGAA GAAATTCTCA AAATAGCTGC TCCTACAACA
CTAGAAAGTA ACAAACGTCA ATTATCTCTT TTCTAA
 
Protein sequence
MAYSIPGLYR RVGYADISSM HPWAMLDKGI CSIKDTERIG LSILQYLVNE KFRLEQLASA 
GDIAAKEKRE SVKVLANSEF GFFGTSELAF NDMEAAALVT AYSRKVLKLM IEIITRHGGT
PVEVDTDGVF FTHSNPEEVR SLLQSQLPKG ITVKLEFIAD AMFIPERGTK NYLLWLPDGK
IITKGNWRNR DRSQLEKEFS IEYLTLLIQN VSAAEDYYAH IKSQILSREY PKEKLAITRK
IKEGEKEILK LGKPGDVVTY YYGISGITNI SSNENYSRQY YLHLIEKRRE EILKIAAPTT
LESNKRQLSL F