Gene Ava_C0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0079 
Symbol 
ID3677818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp107780 
End bp108148 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content44% 
IMG OID637715163 
Producttransposase IS4 
Protein accessionYP_320357 
Protein GI75812740 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGAAAG TTGTTGTCAG TGAAGCCAAT GCGCCGGAAC GGGTACTTGC TGCCTACGCA 
TTAATGGAAC TTTTAGAGGA ACGTCCGGAA TTACTGGAAA AAGTTCAAGT CATGTGGGTT
GATTCCGGTT ACGACGGCGA TAAATTTGCT CTTTCAGTTT GGTTGATGAT CCAAGCACAT
GTTGAAGTCA TACGGCGTAC TGAGCAAGAA TTCCGGATTT TGCCCAAACG TTGGGTAGTC
GAAAGAACAT TTGGCTGGTT GAACCAATAT CATCGTCTCA GTAAGGATTA TGAGCATCTT
CCAGAGATGA GCGAAGCAGC TATATATGCT GTAATGACTA GGATTATGCT ACGTCGTCTT
GTATCCTAA
 
Protein sequence
MLKVVVSEAN APERVLAAYA LMELLEERPE LLEKVQVMWV DSGYDGDKFA LSVWLMIQAH 
VEVIRRTEQE FRILPKRWVV ERTFGWLNQY HRLSKDYEHL PEMSEAAIYA VMTRIMLRRL
VS