Gene Ava_C0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0072 
Symbol 
ID3677811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp100789 
End bp101136 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content41% 
IMG OID637715156 
Producthypothetical protein 
Protein accessionYP_320350 
Protein GI75812733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.83299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAA CAGAATTAAA TATCACGAAA ATCGAACTCA CTCCTAACAG TGGTTGGACG 
CTAAATATTC TCTCACGTCG GGTAGCAACC ATTACCGACC CCTTGGGAAG CAGAAAAACC
AGCTACTTCG GGTTCGATAC CAAAGAACAA GCTGAAAAGT TTAGAGATTG GCTTGTCAGA
AAAAACAAAT GTAGTAGTGC AGTTATCCGT CACTCAGAAC GATTAGCTAC TGAATGGGAG
GTAAAAGCTT GGAATTTACC AACCTCCCTA ATTCTTGAAT GCGCCGTCAA AGATTTAAAG
GAATCAAGCA ATGCAACTAT CTCTACTGAA TCTACCCTAC AACGATGA
 
Protein sequence
MNPTELNITK IELTPNSGWT LNILSRRVAT ITDPLGSRKT SYFGFDTKEQ AEKFRDWLVR 
KNKCSSAVIR HSERLATEWE VKAWNLPTSL ILECAVKDLK ESSNATISTE STLQR