Gene Ava_C0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0070 
Symbol 
ID3677809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp98674 
End bp99357 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content36% 
IMG OID637715154 
Producthypothetical protein 
Protein accessionYP_320348 
Protein GI75812731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.555105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.643653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGTT TTAATCACAA AACACTTGAA CTAGTTGAAC AGAATCCAGA ATGTTTATCA 
ACGATAAATT ATCGTAATTT AACTGTCAAA AGTGAATCTG AAGTTGCTGG CGGTCAGTTT
CACCTCATTA TGCAACAAAT TGGGTTAGGG CTACCAGTCG AAGTTTTGTT AAAAGCATAC
CCCCAAATTA ATAACTGGGT CGATAAGGTA AAACCTTTTC TAAATATTCC TGGCAACAAA
CAATGGAACG CCCAACTTCA ATATTTATAT CACGATATTC TTCTCTACAG CGAGTGCGAC
CTCATTATCT ACGGCGAAAA TCAAGTAGTT GGGTTTGACT GGACAATTCA AAAACCTCCT
AAATTTGAAA TTCTTGAGAG CAAATGGCAA ACTCAACTGA GGTTATTTCT CCTATACGAA
CAAACTGGAA TACCATTGGA GCAATTTAGC CTGGTTTACT TGTTCGTTAA CACTGATAGT
ATTTATCAGT TTACTTATTC TGAAGATAAA CATTTGAATT TCAAAGCCCG GCTAGAAAAA
ACACTCGCTC CTTTTGTAGA AGACGATAAG GAGAAAAAAC TTTTAACCCA CAAAATGACT
CCTCAAGAAG CACATGATAA ATGGCTAGCA AAAGAAATAT CAACTATGGA ATATTTAGCA
GCAATTCCTG AAGTTGAAAT TTGA
 
Protein sequence
MNRFNHKTLE LVEQNPECLS TINYRNLTVK SESEVAGGQF HLIMQQIGLG LPVEVLLKAY 
PQINNWVDKV KPFLNIPGNK QWNAQLQYLY HDILLYSECD LIIYGENQVV GFDWTIQKPP
KFEILESKWQ TQLRLFLLYE QTGIPLEQFS LVYLFVNTDS IYQFTYSEDK HLNFKARLEK
TLAPFVEDDK EKKLLTHKMT PQEAHDKWLA KEISTMEYLA AIPEVEI