Gene Ava_C0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0066 
Symbol 
ID3678103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp95738 
End bp96466 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content35% 
IMG OID637715150 
Producthypothetical protein 
Protein accessionYP_320344 
Protein GI75812727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.894979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.186496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGGCA ACATACACTC ATTCAAAATA CCTATTACTT GTCTAACAGC AGTTAGTTAC 
CTAGGAAATC TTTCCGAACG AGTAAATATC TTAAGTCTGT ATCAAAGATT ATTTCCAGAA
AAATGGTTAG AATCAACCAT ACCTATTAAT AAACAATCAC ATCCAACTAG TGCTTATCTA
GATAGAGAAA TTGAATTTAT TAACCTAGTG AATGAAAATC TATTCCCAGT AGAATATATC
GATGAAATCG AGTTTAATCC AGAACGTGAT AGTATTCTAG TTTCACCACA AAGACTTGAG
TGGTGGAATG AAGATTTCGA GGAATTGGTA TACTCGGAGA AATTCCTACT GTCATTAATG
GGGCAAGGGT ACAATATCAG CCAATGGAAA CTAAATTTTG GTTTTACTCC TGACTACATT
GCTCCAGCAG AAGAAATTTA TTTCGAGAAA TTCATAAAGC TGTGTCGTCG TTACAAAAGT
CCCCTGCAAT ATTTAGATAT AGCCATACGA ATTATAGATT ACTCAACTCA AAATATTTGG
CTAGATATTA CGTGTGAAAC AAGCGATTGG CTGGAATGGA CTTATGATAA TATCGTATTT
CTCGCTCAAA AATGGCAAGA AGCTGTCTCG ATGATGGAGA AATCAAATGA GGTTAGCCAT
TTGTTAGAAA CATCTATTTC TGCTCGAAAA GCAGCAGTGA AAATTTGGAA CCAAGCATCA
AAAGCATGA
 
Protein sequence
MLGNIHSFKI PITCLTAVSY LGNLSERVNI LSLYQRLFPE KWLESTIPIN KQSHPTSAYL 
DREIEFINLV NENLFPVEYI DEIEFNPERD SILVSPQRLE WWNEDFEELV YSEKFLLSLM
GQGYNISQWK LNFGFTPDYI APAEEIYFEK FIKLCRRYKS PLQYLDIAIR IIDYSTQNIW
LDITCETSDW LEWTYDNIVF LAQKWQEAVS MMEKSNEVSH LLETSISARK AAVKIWNQAS
KA