Gene Ava_C0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0063 
Symbol 
ID3678100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp93783 
End bp94781 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content44% 
IMG OID637715147 
Producthypothetical protein 
Protein accessionYP_320341 
Protein GI75812724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.325511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCC AAATCCGTCA TTTGGTATCT TCGCTTGACA ACCTACCCGA AGAATGGCGA 
ATCGTTCCTA CCTTTGGTAA ACGTCCTTTA GGGAAAGAAT GGGAAAAAAA TACTTACTCT
CCCAAAGAAC TACAAACTGA ACTCATCCGC CGCCGATTAA AAGTTTGGAC AAATAACAGA
TTTATCACCC CCACTGGTAT AGCCTTGGTT TGCGGTTTCA ATCATCCCCA AGGGTACTTA
GTGGCTATTG ACTGCGACGG GGAAACATCC TGGCGACAAA TTATTCAGAT TAACGAACAT
TCTGAACCAG AAGAACTCAA CCACCTAACA CCCACCGAAA CACGCGATAC TCCTATGGAG
TCGTTATGCG ATCGCGCTCA ACAATATCTC CCTCCCACAA TTGCATTTAC CTCTGGGAGG
AAATATCGCA GCCAACGCTT ATACCTCATC CCAAATTCAA AAGCTTGCGA TGTCAAATCT
CGCAAAATCA AAACTGGGAA GGACGAACAC CTGGAGTTTC GAGGCAAAAA CCTAGCTTCA
ATTCTTCCCC CATCCTTTCA CCCAGAAGGT AGAAATTACA GATGGCTTCC CGGCTGTAGT
CCATCTGAAC GCCAAATAGA AATAGCTCCC GATTGGGTAA TTGCCCAAAT GCTTGTCAAA
CAGGAGAAAA CAAGAAAGTT TAACCTACCC AAAGAAAAAT ATAACCGCAG ATATGGGGTA
GACAGGTACG CTCATTTAAT TCCCTCAATA GAAACCAATA TTCAAACCGC ACTTGTGCTA
CTCGAAGTCA TCCACCCTCG GTTTGCAGAT GATTACCATT CGTGGATTCA AGTCGGGATG
GCACTCAAGA GTGTTAGTCC CATTTTATTT AAAGCATGGG ACACCTGGAG CCAACTTTCT
CCTAAGTACA AACCAGGCGA ATGCGCCTAC AAATGGCAGT CTTTTAACAA GACAGGTATT
ACTATCCGCA CCTTATTTAG ATTAGCTAAT CTCTCTTAA
 
Protein sequence
MHAQIRHLVS SLDNLPEEWR IVPTFGKRPL GKEWEKNTYS PKELQTELIR RRLKVWTNNR 
FITPTGIALV CGFNHPQGYL VAIDCDGETS WRQIIQINEH SEPEELNHLT PTETRDTPME
SLCDRAQQYL PPTIAFTSGR KYRSQRLYLI PNSKACDVKS RKIKTGKDEH LEFRGKNLAS
ILPPSFHPEG RNYRWLPGCS PSERQIEIAP DWVIAQMLVK QEKTRKFNLP KEKYNRRYGV
DRYAHLIPSI ETNIQTALVL LEVIHPRFAD DYHSWIQVGM ALKSVSPILF KAWDTWSQLS
PKYKPGECAY KWQSFNKTGI TIRTLFRLAN LS