Gene Ava_C0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0059 
Symbol 
ID3678096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp89006 
End bp89800 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content43% 
IMG OID637715143 
Producthypothetical protein 
Protein accessionYP_320337 
Protein GI75812720 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.119267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.341508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTTG CATCTACTGC ACTGCCAAGC ATTCAAAGTC AAACTGACCG CAATTTTGAG 
TGGATTGTCA TCAATGATGG CACTAATCCT GACACCAGAG ATATTATCAC CAGCATTATG
GCAAAAGCTG ATTTCCCCAT CAATTACATT GAAATGGCAC ACCCTGACCC TTGCAGTGGC
TTTGGCTTGT GCTACGCCCG TAACCTGGGA CTAGATGCAG CTGGTGGTGA CATTGTTTCA
TACCTGGACG ATGACAACAG CATAGCTCCT GAATTTGCTG CCTCAATGCG GCAGTACTTT
AAACAACATT CCAATATTCG ATATAGCATA GCAAGACAGC AGCGCCGCCG CGATGTCATC
CGCAATGGTA ATGTTGTTCG TCAAGGAAAG CCGTTTGTTT CGCCTAGCAA TTGCTGCTCC
TTACAGCAGC TTTTATGGCA ACAAGAGATA TTCGACAGCA ATGGTTTCGT CCACTACCGA
AGCAATGCTC CTAGATGGAA CCCCTTGTTT CAAGTATTTG CAGATTACGA GTATTTGCTG
CAATCTGCTT GCATCTGGGG TGAAAGTGGC TTTGGTTTCA ATGACAGCAT TCTTGTTAAC
TATATCCAGT CTTCTATTGG TATTATTGGT AGTTCTAATT ATGAGCAGTG GGCAACTGAG
CTATCGCTAA TTGTCACTAA TCAAGCTAAC TATTCCATTT TTAAAGGCAG TATTGTTGAA
CGCTTAGAAG AGCTTGTAGA TAGTTATAGT ACCAAAGCAC AAATTTCATT AACGCCAAAA
GCATTTGCGT TCTGA
 
Protein sequence
MQLASTALPS IQSQTDRNFE WIVINDGTNP DTRDIITSIM AKADFPINYI EMAHPDPCSG 
FGLCYARNLG LDAAGGDIVS YLDDDNSIAP EFAASMRQYF KQHSNIRYSI ARQQRRRDVI
RNGNVVRQGK PFVSPSNCCS LQQLLWQQEI FDSNGFVHYR SNAPRWNPLF QVFADYEYLL
QSACIWGESG FGFNDSILVN YIQSSIGIIG SSNYEQWATE LSLIVTNQAN YSIFKGSIVE
RLEELVDSYS TKAQISLTPK AFAF