Gene Ava_C0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0058 
Symbol 
ID3678095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp87780 
End bp88970 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content42% 
IMG OID637715142 
Producttetrahydrofolate dehydrogenase/cyclohydrolase 
Protein accessionYP_320336 
Protein GI75812719 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.193098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.40195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGA TAGATGGACA ATTAATACGA GAACACGTAA AGCAAGAATG TCAAAAATAC 
AAATCCATTT TTCAAGCATC TCAAAAAGAA GTAGCAATCA TCAGATTTGA GGCTTCAGAA
AATGCCAGCA ACGGACTAAG AGCTAGATAT GAAGCAGCCA GAATCTCAGC AGAACAAAAA
GTAGCAACGT TCAACGCTAT TGGCATTACT CCCAATTATA TTGTGCTGTC ACCCAATATT
GCAGTAGAGC AATTTGACAA CATTATCCAA TCCATTAATG AAAACAGCAA GGTGACTGCT
GCTATTGTTC AATACCCAAT TCCAGCTAAG TTTACAACTT CAATTGGGCT ATTAGAACCA
CAAAAAGATA TAGATATCGT CCGCAGACAA AGTAACAATT TTTTTGAAAG TTGTGCTACT
GCTGAAGGAA TCGCCAGAAT TGTTGAATCC TATGCACAAA GCGATTCCAA TGTTGCAGTT
GTCGGTGGAG GTGGCTTTGT GGGCAATGGT GTCATCAAAT ATTTAGAAGC AAGTAGAATC
AGCTGTTTCT GTTTGGAAGA CGGCGATGAC TTGAGTAGAA CTCAAGCAGC TGACATTGTG
GTATCTGTCA CCGGAAGACA AGGAATTTTC ACTCCTTATG TACTCCCGTC TCATCGCTTG
GTTGTCGATG GTGGCTTTAC ACCTACTGCT TCTGGTGCTG CTGGCGATGT AGATCGCAGT
GCTTACAGAA TCCCCCAGAA CATTACGCCC GTCCCTGGAG GTGTTGGCCC GATAGAAATG
GCAATTTTAG CAGAACGTTT GGTAAAAATA GATTTGGGCG TAGAACTTGG GAAATGGAAC
TACCAGCAAT TACAGCAAGA ACAAATGCAA CGTGCTACTA TAATAGCCCC CATAGCTAGA
GTGTTCTTCG CACAACAAGC AACTGCTTAC CCTCAATCCA TTCGCACAGA GAGAGAAAAC
CTATTTGTCT TGGAAGGCAG TAACTACCAG ATCCGCTTCA ATAGCACCAC GCAAAGTTTG
ATTGTTGCCA GAACCAATGA AAAGCTAACG TTAATTCGGC TATCTCTTGC AAGTAATCAA
ATTGAAACCG CTAGAGGTAT AACAAACGAG GACGTAACAA GATGGCAACA AATTCAAGCT
GCGATCAATT CAACAACAAC GCAATCAAAT GATAGAGGTA TGGAGCTTTG A
 
Protein sequence
MTLIDGQLIR EHVKQECQKY KSIFQASQKE VAIIRFEASE NASNGLRARY EAARISAEQK 
VATFNAIGIT PNYIVLSPNI AVEQFDNIIQ SINENSKVTA AIVQYPIPAK FTTSIGLLEP
QKDIDIVRRQ SNNFFESCAT AEGIARIVES YAQSDSNVAV VGGGGFVGNG VIKYLEASRI
SCFCLEDGDD LSRTQAADIV VSVTGRQGIF TPYVLPSHRL VVDGGFTPTA SGAAGDVDRS
AYRIPQNITP VPGGVGPIEM AILAERLVKI DLGVELGKWN YQQLQQEQMQ RATIIAPIAR
VFFAQQATAY PQSIRTEREN LFVLEGSNYQ IRFNSTTQSL IVARTNEKLT LIRLSLASNQ
IETARGITNE DVTRWQQIQA AINSTTTQSN DRGMEL