Gene Ava_C0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0056 
Symbol 
ID3678093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp87025 
End bp87438 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content40% 
IMG OID637715140 
Producthypothetical protein 
Protein accessionYP_320334 
Protein GI75812717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.096065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.32678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATTT TAAATCAACA ACAGCAGGCT GAATTAATTA TTCAACAAGC TTGCAAGGAA 
AATTTTACTG ATAGCGAGAA AGCTATTTAC GATGACTTTA TTCTGGAAGC GGGGGTAAAA
AACCCAGCTA AGATGACTGA GGCTACTGCT GATGCTTTGA TTAGATACCT TAATGGCTGC
GAAGCATCTA ACGAATTTGT TGCTAATGTA GTAAATCGCC TCGCGCAAGT TGCCCCTGCT
CATATCATGA CCAAGATTCT TCTCAGCGAT AATGATGGTG ATGGTGTGCC TTTATACCAA
GAACTCCAAC TTGGTACAAG GGCTACTATA TTTAATGCTC CGTCAGAAAT AGCTGCTGCA
CAGCAAAAGC AATATCAGTT TTTGATCAAT CGGGATTGTA ATCCTGAGTT ATAA
 
Protein sequence
MTILNQQQQA ELIIQQACKE NFTDSEKAIY DDFILEAGVK NPAKMTEATA DALIRYLNGC 
EASNEFVANV VNRLAQVAPA HIMTKILLSD NDGDGVPLYQ ELQLGTRATI FNAPSEIAAA
QQKQYQFLIN RDCNPEL