| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0055 |
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| Symbol | |
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| ID | 3678092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007412 |
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| Strand | - |
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| Start bp | 86197 |
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| End bp | 86862 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637715139 |
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| Product | hypothetical protein |
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| Protein accession | YP_320333 |
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| Protein GI | 75812716 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0240243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.209522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATTGC CACAACAATG TCATCAGTTT ATGGACGAGC AAAACCTCTA CCTGCAAGCG
TTCATCCAAG AAGCTTGCAG CCACCTACCA AACAGTCCAC AGCGTCGTAA AGCCCTCAAT
AGCATACTTC GAGGAGTCTT GAAATCGCCG TGTACTTGGA AAGGAGTAGG CGATCTTTAT
GAGGAGGCTT TAGTTGAAAC AATGATGTTT GTAAGTGAAA AACTCTGTGA GAAATACGAT
CCAAAACGAG GTTTATTCTG GCACTGGTTT AACGCCTGCC TTCGCAACAA ATACAAGGAT
AAAATTCGTG CTGTGCAACG TGATTACTCT CACAAGTATA CAGGTGAACT AAATCTTTTA
GATCAAGTCA TTTCTGGTGT AGATGCCACC TTGCTTCTCG ATACTTGGGA ATCATTTGTT
CAGTGGATCG AAGACAATCC TGATAACATT CTTAGTGATT GCCATATCAG AAATAACCCC
AGAGCTAACT GTCAGTCACT CGCTTACTTA AGAATTGTCT TAGGCAAAGA ATGGGAGGAA
ATCGCTGCGT CAGTTGGCTC AACACGCGGT GCAGTTACAT CCCACTGGTG CAGAAAATGT
GAACCATTGT TGCGAGAGTG GTTGGATACA AATCATAGTT TTTTTGGAGA AGATAACTAT
GGATGA
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| Protein sequence | MTLPQQCHQF MDEQNLYLQA FIQEACSHLP NSPQRRKALN SILRGVLKSP CTWKGVGDLY
EEALVETMMF VSEKLCEKYD PKRGLFWHWF NACLRNKYKD KIRAVQRDYS HKYTGELNLL
DQVISGVDAT LLLDTWESFV QWIEDNPDNI LSDCHIRNNP RANCQSLAYL RIVLGKEWEE
IAASVGSTRG AVTSHWCRKC EPLLREWLDT NHSFFGEDNY G
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