| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0050 |
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| Symbol | |
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| ID | 3677841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007412 |
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| Strand | - |
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| Start bp | 74071 |
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| End bp | 80961 |
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| Gene Length | 6891 bp |
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| Protein Length | 2296 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637715134 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_320328 |
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| Protein GI | 75812711 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.133604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATATA TTTTTGGAAA TTATGACTTT TCTTTGCCAC AATACTACTA CAAGTCTTAT
TACAATGAAG CTCTTGAATT AGTAGTCTCA AAAAGATGGA ATGATAATCA GACTATTGCG
AAAGCGGCAC TTAATCGCTT TATGGACGAA GTAGCTTACC AAGAAACAAA AGGTATAAAT
GCATTACAAG ATAATGGAGG TCCTGGTAGG GGTTATTTTC AATATGAGAT GGCTTCGGGG
GGAGGATCAG GAGGAGCTAA TACTGCTATC AATCGTGCAA CCAACTGGTA CAATAAAAAT
GGAATATCAG TACCAAATTG GCTCAATCAA TTGAAAGGGA AAGATGTTGA TTTCACGTCT
CTTTCTGCTG ATCAACAATG TACGATATTT CTACTTGATA AGGTAGAGGA TAATAATACT
TACCTAGATA ATATTGTAAA GAGCTACGGT ACTAACAACT GGGATGATAC TTCTGAAGAA
AATTGGAGAA TAGGACACTA CGGTGGTAAA AAAACACATG AATGGAGAGG AGAAGAAGCA
TCAAATGGCT TGATGCAGTC AAATATAGTA TTAGAAGAGT TATTGTATAA ATTAACAGTA
CCGCAAACAA CTTTCCCTAC ATTAGTAACA CAACATTGTT TTCCTGCGGG TGTAACAATC
TTAATGTCAG ATGGCACATA CAAACCCATC GAACAAGTTG AAATTGGTGA TGAAGTAATG
GCATTTGATG GGTTGGGAGA ACTTCAACCT CGCAAAGTAA CACAAACATT TATCACACCA
GATCGAGAAG TCGTCCAGTT AGGTAATATC AAAGTCACTT TAGGACATCA TTTCTTACAG
CCTGATGGCA GTTTTAAAGC TTTAGGTGAA ATTGATACTA ACGGCTTTTT AGTCGGAGTA
ACAGGTAAAC TCATTCCTCA TCCTGGTATT AAACCAGTAG CAGGTAAGCA TACAGTCTAT
AACTTTACTG TTGAAGAATT ACACACCTAT GTGGCAGGAG ATTATCGAGT TCATAATGAA
TCTCTAAGTA CTTATCAACC TGTCACTGCT GCTGGGATAA TAGGTGATGC TTTAGGTGGG
CAGGTTGCTT CTCTATTGGC AGGAAAAGAC CTCTCTGAAC AGTTAATTTA TAATGCTCTT
GGCAAAACTT TGGGTGGGTT TATCGGCGAC AAAGCTAGCT ATTATTTTTA TCCCACCATT
ACCAACGGCA AACAAGATGT ATTGGACAAT GTGGCGCTTT TAAAACGAGT TCCTGGGGCG
CTGACTACCA CAGCACTGTC CATAGGTGGA TCACAACTGG CAAAATCGTT GAACAAATTA
CTCGACACTA ATAACCCTAT TGCTCAAATT GGTGTCGGAG CCTTATCAAC AGGCCTTGTC
AATTACGCAT GGAATGCAGG GGTTATCGAT TCGTTAAAAA TCTATCCGGG TATTGGTGGT
GATGTCTTTG CCAAATGGTT TGGGGCGCAT CCTAATGTTT TACCTGATGG TACATTAGAA
CGTGTAAATG GCAATCTTGT CATCAAAGAT TACACCTTCG ACGATTTTAC GCTCAACGTT
GCTAACGTCG GTGCATCGAT GTTTGGTGCT TATACTGGCA GCCAAATCTT CAAAAACTCT
GTGGGGAGAT GGAACATCCT CAGCGAAAAC CTACAAAATG AAGGGGCTGC GATTGGCAGT
TCTATTGGTG GATTAATTGG AAGCTTTGCT GCAAGCGCAA CGGCAACAAC CGCATCTGTT
AGTTATGCAG TGTATATAGG ACAAGCATTA GGCATTGGCA GTACGGCCAT AGCAGGACCA
GTAGGATATG CTATTAGTGC TGTTATTAGT ACAGTTATTG GCGAAATTGC TGGTGGCTGG
CTGAATAATC TCTTCGGAGA CAAAGATTAC CCAAGAGCGA CCTACAGGGT GATATATGAC
CCAAAACTGG GTTATTTCAC CAGCACCAAA TCCTATGAGC TTGATGGCGG TAATCCTACA
GCAGCCAAGC AGTTAGGTGA TACGGCGCGG GATCTGCTGA ATGGCCTTTC CAGCATGATA
GGCGGCGAAT TGAAAGCAGC ACCCAATTTT TACTACGGCA ACTATTTTGA ACAACAAATA
TATCAGGACG AAACCTCTTG GGGCGCAAAC GTCGCTCATC ATGATTTCCG TGGTCGCCAC
GGCTTCTTGA GTGGACAGGA TGCCCTCGAA GCGGGCGTGT TAGAACAATT GCACTTGTCA
ACATTCCTGG GCGCAAACCC TTATTTGCAG AAGGTAGTAA GCACCTTCCC GATTTATCCG
CACAATGAAA AAATGACTGT ACAACTGCAT TTAAGCGATG CCACAGCACA ACTCTTAAAA
GCGCAGGAAT ACACTACCTA TGCTAATAAT CCGGTGCTGT ATATCAAAAC TATGCAGATG
CTGGAGCAGG AACAAGCAAA AACTTCTAGC GATGCTATCA GGACAGGCAT AGCCGCAGGA
GTGTATCAGG GTAAGGATGC AGGTGCGCGT TGGGACTGGC AGAACAACAT TCTCTACATG
GGCTATAACT ACCAGCCGGA CACTACGCCT TTTGCCGTTA CCAGCAGTGG TACGCTGGTG
GCGAACTATG TCGGGATACC CAACTGGAAA ACCAACCCTT CCCAAGTCCG CATTATCCAG
TTTGCCGATA ACAGCCGCTA TGTACCAGTT ATTTCTAGTG ATGGCTACAA TGTCATCCTG
CGCCCGGAAG CCGTGGTGAA CTGGGAGCAA ACCAAAACCT GGGGCGACAG CATCGGTCTT
AACCAGATTG CTGCTCAGGT GCTTGATCCG GCGCGTATTT CCGGCAACGC GATTCGCGCT
GGTGTTGCTG CTGGTACTTA CGCTAATAAA GAGGCAGGCC CGCGCTGGGA CTGGCAGAAC
AGTATTCTTT ACATGGGCTA CAATTATCAG CCTGATACGA CACTGTTCGG TGTTACCGAT
AGCAACGTGC TAGTGGCACC CTATGTGGGG GTTGCAGACT GGCGATATAA CCAGTCCAAG
GTAAAAATTA TCCAGTTCGC CGACGGCAGC CGCTATGTGC CAGTGATTGC GCCTGACAGT
TACACTGTTT TACTACGCCC AGAAGCGGCG GTAAACCAGA TCGTTGTAGG TGGCGGTCAG
TCGAACAACT ACACTGGCAC TAGCGGCGAT GATGTGTATA TCGGCAAACC AGGACTGGAT
CGTTTTACTG ACACGGGAGG AAACGATATT TACCTGTTTC GCCAGGGCGA CAAGAGTAAA
GTGATTACCG ATACCGCCGG GTATGATGTG ATCCGCTTCG GCGGCGGTAT TACCGCTTCA
CAGATAGTTG TCTACCGCGA TGGTAACGAC TTGATGCTGG GTATTAACAA CATTGGCTGG
ACGACGGGAC AGCCTTTCGC CTTTCCTGAT GTGCTGCGGA TAGTGGGATG GTACACCAAT
ATCAATAATC GCATAGAGCA ATTGCATTTT GAATATAACG CGCAGTATTA TCTCGAAACG
CAATCCAACG GTAATGTATA CATTCGCCGG GAAAACAAAG TAGGTCCTCC CAGTCTGGGA
AACTGGATTA CTGGGAGTAG TGCTGCTGAA GTTCTCTATG GTGGTATTGG CCCCGATTTA
ATACAAGGTG GTACTGGTGA TGACCTGTAT ATCCTTCAGC CAAGTACACA AACCGTTGTG
ATCGATGATT CTCCTGCTAA TAATGGTGTT GTCGTTCCTG GTGGTACAGA CACACTCCTA
ATTAAAACTG CCAAGTCAGA TGATATATTG TTGACACTGG AAGGACAAGA TTTACTGGTA
AGCCTCAAGA ACACTTCTTA TGCACCCATT CGTCTTAAGA ACTGGCTTGA CCCCAATAAC
CGCATTGAGA AAATACGCTT TGAAAATAGA CTGGAATTTC CTCTGGTATT AGGCAGCGAT
GGTAAAGTGT CCTTTCCATT GGTGATTGCT CTGAACGGGA CATTGCCAGG TAACGTTACA
CCTCCTATTT CCTCTAGCGT TCAAATCAAA GGAGGCTTGA TTTCTGGCAG CAATGCCGAT
GATATTCTCT ATGGTGGCCC TGGTCCCGAT CTAATGCAGG GGGGCGGTGG TGATGATGTC
TACATTCTCA AACCAGGTAC ACAAGCCGAT GTGATTGATG ATTCTCCTCT TTATAACGGT
GTCGTGATTC CCGGTGGTAC AGACACATTG CAAGTTGAAA CTGCTTTGCC AGATAATTTG
GTGCTAACGC TGGATGGTCA AGATTTGTTG GTGAGCCTCA AAAATACTTC CTATGTGCCG
ATTCGCCTGA AAAACTGGCT TGATCCTAAT AACCGCATTG AAAAACTACG GTTTGACAAT
GGACTGGAGG GGTTGCTGGC GCTAGGCAGT GATGGCACAG TGAAGTTCCA ACCGTTTTTA
GGGAAAGGAG CATTAGCGTT TGGTGTGCAG CCGACTCTCT CCACCAATGT ACAAATTAAT
CGTCTGCACC TTGCCGTGCT GGATTTGGAT GGCGACGGAC TCAACATTAT CAACAATGAT
GTATCGCCAG CACAATATGA CATGGATGGC GATGGCTTTC TGCAAACAAC CGGCTGGCTT
GGTGGCAATG ATGCCTTCCT GACTATAGAC CGTGATAACA GTGGAACAAT TGATGGTCTT
AATGAGTTAA TATCTTTTCA AACTGGCATC CCAGGCACAG CCTATATTGG ACAGTTTGAT
ACCAATCGTG ATGGCGTACT AAGTACAGCC GACGGCGCGA TTTTCTCGAA ACTGCGGCTA
TGGATTGACA GCAATTACAA CGGTCAAACC GATTTAGGGG AATTACAGCA ATTAAGTGTC
GCTGGTATCG ACATGATTGC GCTGGATACT GCACCTATAG ATTATTTTGT GAATGGAGCC
GAGCTTGTCT CAACAGGGTA TTTTATTCGC TATACTGGCA ACATTTATAA ACACATCGGC
GAACTGTACG GAGTTGATTT CGCCTATACC ACCACACAGC AATCACGCCT TGAAATCGTG
TCTGCTAACT TTGCCCGCCT TAATTACAAG GATGATCGCG ATATATGGAT ACCGAATAAT
TCTTCCCTTG CCGCAACAGT TACAATTGAC CCCCGTGAGG TTGCCTCTCT TACTGCTGGT
GATAACAACG ATACTGTCAC TGTCTTCACG GGCTATGCGA ACGATATCAT CCTCAATGGC
GGTGCTGGAA ATGACACTCT GACAGGTGGT GATGGCGATG ATATTATCAC AGGCGGCGAG
GGAAATGACG TTCTAAACGG TGGTGCAGGC GATGATGTGT TGAACGTGGA TACTACTGAC
AACCTTGCAG CACTGCGCGG CGGCACTGGT TTTGATACAG TTATTTTTGA CACAGGCACT
ACAGCTTTTA GCTTCGCCTT GGGGGATGCC AATAGTATTG AATTCCTTAT TGCTAACGAT
GGTGCAAATA CGATTACGTA TTACGGTGCA ACTAGTGTGG TTTTCTCTGG ACTCGGCGGT
AATGATGTTT TAGTAAGCGG CATAGGCAAC GATCGCCTAG AAGGTGGTGA TGGCTTTGAT
ACTCTCACGA GCAGTCTTGG TAATGATGTA TTGATTGGTG GCCGTGGCGA TGATATTCTG
GACGGTGGCG ACGGGTATGA TACCGCAGTG TATCAAGGCA GCATCTTCAC TAATGTAGTG
AATTTCAACG GCAGTTATAC TTACGTCAAA GATACAGTAA ATAACCGTAA TGATACAGAC
CGTGTAAGCA ATGTAGAAGC CTTCAGCTTT GATGATGGTG TGCGTACTTG GCAGGAACTG
CGGGACTTTG AAGATTTCTA CCGCCTTCGT AACCCTGATG TGGTTGCCGC TATCAATGCC
AACAAATTTA GCTCTGGTTT CTATCACTAT GTCATCTGGG GCAAAAACGA AGGCCGCCCT
ATCAGCTTTG ATTTCAATGA AGCTTATTAC CGCTTGCTGT ATAAAGATGT CGATGCGGCA
ATCAAAGCGG GTAGTGTGCG TTCCGGCCTA GCGCACTATA TTTCAACTGG CTTTGCCCAA
GGTCGCCAGA CCAATTTTGA TTTCAATGAA ACCTATTATC GCTTGCTTAA CCCCGATGTT
GACGCTGCGA TTAAAGCAGG CACAATGCCT TCTGCACTCT ATCATTTCAT AAACCACGGT
TATAGCGAAG GCCGCACGCT TGCCAGCCAG TTCAATGAAA ATTACTACCG TAGCGCGAAT
GCTGATGTCA ACGCCGGAAT TATCGCCGGA ACTTATAAAT CCGGTTTGGA TCATTATATT
AAAACAGGCT TTGCCGAGGG TCGGATGGCG CGGTTCGATG CGTTCAGCAG TACGTTGACA
CACGGCACTA ACAACAAGGA TTACATTGTA GGTAGTGCTA ACAATGATGT GTTGAGAGGC
TTTGCAGGAG ATGATATTAT AAACGCTGGC AATGGCAACG ATACGATTCA GGGAGGCATT
GGTAACGATA TACTGCGCGG CGAAGCTGGC AATGATGCAC TTTATGGGGA CGATGGAAAT
GATTATCTCA TAGGCGGTGC TGGCAACGAT ACTATGGATG GCGGTGCCGG TACAGACACC
TTTTCTTGGG ATGCAACTGC TCTTAAAAGC AATGATCTGA TGGCTGGCGG GCTGGATACC
CTGCTTAATC CCAAAGGAGA TCGGATCGAT TTTACGAGCA ACGTGGAAGC CCTGCTCAAA
ATTGGTGGAC AGACACTTGC CTCGCTTACT GCTGACAAGA CCCTTACCAA TACTGTCACT
AGCAGCATCA CTTTCGGTAC AGGCAATAAT CTTCGTTTCG CCAACAGCTT ATTGCAAATC
GATCTTGATG GTAATGGCAG TTTCAATGCC ACCAATGATT TTCAAATCAG CCTCAGCGAT
GCTAACAGTC TTACCTATAA AGCTGCTGGA GATTTCTTTA TCGTTAGTTA A
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| Protein sequence | MEYIFGNYDF SLPQYYYKSY YNEALELVVS KRWNDNQTIA KAALNRFMDE VAYQETKGIN
ALQDNGGPGR GYFQYEMASG GGSGGANTAI NRATNWYNKN GISVPNWLNQ LKGKDVDFTS
LSADQQCTIF LLDKVEDNNT YLDNIVKSYG TNNWDDTSEE NWRIGHYGGK KTHEWRGEEA
SNGLMQSNIV LEELLYKLTV PQTTFPTLVT QHCFPAGVTI LMSDGTYKPI EQVEIGDEVM
AFDGLGELQP RKVTQTFITP DREVVQLGNI KVTLGHHFLQ PDGSFKALGE IDTNGFLVGV
TGKLIPHPGI KPVAGKHTVY NFTVEELHTY VAGDYRVHNE SLSTYQPVTA AGIIGDALGG
QVASLLAGKD LSEQLIYNAL GKTLGGFIGD KASYYFYPTI TNGKQDVLDN VALLKRVPGA
LTTTALSIGG SQLAKSLNKL LDTNNPIAQI GVGALSTGLV NYAWNAGVID SLKIYPGIGG
DVFAKWFGAH PNVLPDGTLE RVNGNLVIKD YTFDDFTLNV ANVGASMFGA YTGSQIFKNS
VGRWNILSEN LQNEGAAIGS SIGGLIGSFA ASATATTASV SYAVYIGQAL GIGSTAIAGP
VGYAISAVIS TVIGEIAGGW LNNLFGDKDY PRATYRVIYD PKLGYFTSTK SYELDGGNPT
AAKQLGDTAR DLLNGLSSMI GGELKAAPNF YYGNYFEQQI YQDETSWGAN VAHHDFRGRH
GFLSGQDALE AGVLEQLHLS TFLGANPYLQ KVVSTFPIYP HNEKMTVQLH LSDATAQLLK
AQEYTTYANN PVLYIKTMQM LEQEQAKTSS DAIRTGIAAG VYQGKDAGAR WDWQNNILYM
GYNYQPDTTP FAVTSSGTLV ANYVGIPNWK TNPSQVRIIQ FADNSRYVPV ISSDGYNVIL
RPEAVVNWEQ TKTWGDSIGL NQIAAQVLDP ARISGNAIRA GVAAGTYANK EAGPRWDWQN
SILYMGYNYQ PDTTLFGVTD SNVLVAPYVG VADWRYNQSK VKIIQFADGS RYVPVIAPDS
YTVLLRPEAA VNQIVVGGGQ SNNYTGTSGD DVYIGKPGLD RFTDTGGNDI YLFRQGDKSK
VITDTAGYDV IRFGGGITAS QIVVYRDGND LMLGINNIGW TTGQPFAFPD VLRIVGWYTN
INNRIEQLHF EYNAQYYLET QSNGNVYIRR ENKVGPPSLG NWITGSSAAE VLYGGIGPDL
IQGGTGDDLY ILQPSTQTVV IDDSPANNGV VVPGGTDTLL IKTAKSDDIL LTLEGQDLLV
SLKNTSYAPI RLKNWLDPNN RIEKIRFENR LEFPLVLGSD GKVSFPLVIA LNGTLPGNVT
PPISSSVQIK GGLISGSNAD DILYGGPGPD LMQGGGGDDV YILKPGTQAD VIDDSPLYNG
VVIPGGTDTL QVETALPDNL VLTLDGQDLL VSLKNTSYVP IRLKNWLDPN NRIEKLRFDN
GLEGLLALGS DGTVKFQPFL GKGALAFGVQ PTLSTNVQIN RLHLAVLDLD GDGLNIINND
VSPAQYDMDG DGFLQTTGWL GGNDAFLTID RDNSGTIDGL NELISFQTGI PGTAYIGQFD
TNRDGVLSTA DGAIFSKLRL WIDSNYNGQT DLGELQQLSV AGIDMIALDT APIDYFVNGA
ELVSTGYFIR YTGNIYKHIG ELYGVDFAYT TTQQSRLEIV SANFARLNYK DDRDIWIPNN
SSLAATVTID PREVASLTAG DNNDTVTVFT GYANDIILNG GAGNDTLTGG DGDDIITGGE
GNDVLNGGAG DDVLNVDTTD NLAALRGGTG FDTVIFDTGT TAFSFALGDA NSIEFLIAND
GANTITYYGA TSVVFSGLGG NDVLVSGIGN DRLEGGDGFD TLTSSLGNDV LIGGRGDDIL
DGGDGYDTAV YQGSIFTNVV NFNGSYTYVK DTVNNRNDTD RVSNVEAFSF DDGVRTWQEL
RDFEDFYRLR NPDVVAAINA NKFSSGFYHY VIWGKNEGRP ISFDFNEAYY RLLYKDVDAA
IKAGSVRSGL AHYISTGFAQ GRQTNFDFNE TYYRLLNPDV DAAIKAGTMP SALYHFINHG
YSEGRTLASQ FNENYYRSAN ADVNAGIIAG TYKSGLDHYI KTGFAEGRMA RFDAFSSTLT
HGTNNKDYIV GSANNDVLRG FAGDDIINAG NGNDTIQGGI GNDILRGEAG NDALYGDDGN
DYLIGGAGND TMDGGAGTDT FSWDATALKS NDLMAGGLDT LLNPKGDRID FTSNVEALLK
IGGQTLASLT ADKTLTNTVT SSITFGTGNN LRFANSLLQI DLDGNGSFNA TNDFQISLSD
ANSLTYKAAG DFFIVS
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