Gene Ava_C0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0049 
Symbol 
ID3677840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp73009 
End bp73851 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content38% 
IMG OID637715133 
Producthypothetical protein 
Protein accessionYP_320327 
Protein GI75812710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.317193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACTA CAAAGCGCGT AATTAATATA AGTGGAAAAT TCGGTAGTTG GACTGTATTA 
GAAAAACAAG GAAAGCAAGT ATTATGTAAG TGTGATTGTG GAACTCAAAA ACTTGTCTAC
AGTCACACTC TCACCAATGG TCGCTCTACT AACTGCGGTT GTAAGAAAAG AAAAGAATCT
ATCCCAGTTG GTGCAAATTT TGGGAGACTA AAAGTTATAT CTGATGTAGA AGTTAAGGGG
AAAAGGGGTG AACTACTCCT CCTTACCTTA TGCAGATGCG GAACCCAAAA ATATGTTAGT
AAAAATAGCT TAAAAAGAGG GCTTACACAA AGTTGCGGCT GTTTGCAACG GGACAGCCTC
AAGACCGATA AAACTATCCA CGGTCACTGC AAAAGCCACG AGTATAACTC CTGGTTACAC
ATCAAGCGTA TCTGCTATAA CAAGAACCAC CATCAGTACA AATATCATGG CGGGTGCGGA
ATTGAAGTTG ATGCATCCTG GCGTGATAAC TTTACCCAAT TTCTAAAAGA TATGGGATTA
GCACCCGAAG GAACAGTGAT ATCTCGTATT GATCAAGAGA GTGACTTTGC CCCTGGTAAT
TGTCTGTGGA TACCCAGAAA AGAACATTAT CGTCAAATAC ATGTATTAAG AAGAAAAGAA
TTATTTATTT CTCAAACTTT ACCCAAACCA GTCGTTACCA ATAGTGAGAT TAATGTTTCA
CCAAACATTG TTCGAGCAAT CATCAAAGAT CATGCAAATG GTGAAGCCAA CATGAATAAA
CTTGCTACAC AATATAAAAT TAGCACTCAA GATGCGATAA ATATTATCCT TCACCACGTT
TAA
 
Protein sequence
METTKRVINI SGKFGSWTVL EKQGKQVLCK CDCGTQKLVY SHTLTNGRST NCGCKKRKES 
IPVGANFGRL KVISDVEVKG KRGELLLLTL CRCGTQKYVS KNSLKRGLTQ SCGCLQRDSL
KTDKTIHGHC KSHEYNSWLH IKRICYNKNH HQYKYHGGCG IEVDASWRDN FTQFLKDMGL
APEGTVISRI DQESDFAPGN CLWIPRKEHY RQIHVLRRKE LFISQTLPKP VVTNSEINVS
PNIVRAIIKD HANGEANMNK LATQYKISTQ DAINIILHHV