Gene Ava_C0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0046 
Symbol 
ID3678122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp70477 
End bp71310 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content36% 
IMG OID637715130 
Producthypothetical protein 
Protein accessionYP_320324 
Protein GI75812707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.185589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTA GCCATAACCA ACTATTAGAA AATCAAGAAA TTATCAGTCC AGTTGATGGT 
GTAGATTTTC CATTGGTAGG AAATGCGATC GCCAAAGCAC TTGCTAAATA TTTAGGAAGC
ATCTATGAAG ATAAAACATG GTTTACTAAT TGTCTTGCTC AGGTTGGAGC CAAAGCCCTC
AAAATAGAAT ATGCTTTTGA TTACTGCGTT ACCAATTCAA CTTCCCTTGA AGAAGAATCT
CTAAAGTGTA TGCTGCTGGG CGCATTAGAA AATTATGCAC GTAGCCGTAA CATACATGAA
ATTATTCAAC CTTTTCTACA AGGAGAAAAA ACCCTTAAAC TTGAACCAGA ATATTTCAAA
AAATGGCTTC CTAGTATTCA AGATACATCT CAAATTATCG GTATTTTACC CCGTACTTGG
CAAACTGTAG CTAATCAAGT GAGTGGAAAT ATCACCTGCA ATGCTTCATA CCCTTTAAGT
GAATATCTTG GAGGTGCTGA TTGCCAAATA ATCGCTGGAA ATACTCTTAT TGATGTACGA
ACAACTGCCA AGAAGCGTCC TTTCTCCCTA GAAAATTTTT ACCAACAAAT TAGTTATGTT
CTGCTTGATA GCAATGACAC CTATCGTATC AATCAACTAG TCTGGTTTTA CAGCCGTCAA
CAGTCGGTAT TCTTCTATCC CACTAACAAA ATATTCCGCG ACTTACAAGC AACAAGGGAA
GAATTTAAGA AAATGATTCT TGATAATTAT GAAAAAAATA GACTAGCAGA ACAGAATAAG
GGTTTATATC TTCCCCAGGA AGGATATAAA TATGATTCAA GATTTTCAAC TTAA
 
Protein sequence
MITSHNQLLE NQEIISPVDG VDFPLVGNAI AKALAKYLGS IYEDKTWFTN CLAQVGAKAL 
KIEYAFDYCV TNSTSLEEES LKCMLLGALE NYARSRNIHE IIQPFLQGEK TLKLEPEYFK
KWLPSIQDTS QIIGILPRTW QTVANQVSGN ITCNASYPLS EYLGGADCQI IAGNTLIDVR
TTAKKRPFSL ENFYQQISYV LLDSNDTYRI NQLVWFYSRQ QSVFFYPTNK IFRDLQATRE
EFKKMILDNY EKNRLAEQNK GLYLPQEGYK YDSRFST