Gene Ava_C0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0042 
Symbol 
ID3678118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp63405 
End bp64256 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content47% 
IMG OID637715126 
Producthypothetical protein 
Protein accessionYP_320320 
Protein GI75812703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.144366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.528183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTAA GAGATATAGC CGATTTTAGT TTAAGGATGC CTTGGGCGAT TGCCTCTGGC 
ACTGCGCTCC GCGCAATCGC CTTTGGTGGG TGCCTTACCA TCGCCACCAT GTTTGCACCA
AACCAACTTG TACTGGCAAG TACTATCCGT CAAGTTGCAG CGTCCCAGGT GTCAGGGGAA
AATGCCCAAT TGCAGACAGT TAAGGTGTGG CCTGGACATG GGGTATCAAT ATCGTTCTAC
AACACCAAAG AAATTATCAA GAAAATCTGG CTGGATGACC CATCTAGGTT TGTTTTTGAT
GTAGATGGAT GTCTTGAGGG CTTGGGTAAG TGTTCTAGTA ACAGTACGGG TGCAGGACTA
ATTCACATTC GCCGCATCGA GACAGTCAAA ATCCCCGGTT TACCACCAGC TCCTTCCGGG
GCGCACATGA CGGTGATTAC CGAATCTGGC TCAACAAAGA AAAGCTATCA CTTCCGGATT
GTAGCGGGCA GTGGCACACC AGAGTACAGC CAAATTGAAA TTATTGGCGA CACTCCCAGC
AAACCTGAAG AAGTAAAACC AAAGGTCAGT TACACCGCAT TATCTGATAG CAGACATATC
GCCAAAGGAA TGCAAGTTGC TCTAAAAAAC CAGTGGGTTA CGACAGACAG CAAGCTTTGG
AAGCGTCTGA ACCAACTTGT TGAGTTGCGA TCGCAAGGAG AGGAACTTGT CGTTGCCGCC
AGCACCGCCG GAGTATCAAT GCAATTGGTT GAAAAACTCA TGCTACTGGG TGGAAAGCGC
TTGTTAGAAA TACCACCACA GCGCAATAAC CCTCTGACAA CAAAAAACCC AGGTAAAACA
ATTTTTAAAT AA
 
Protein sequence
MKLRDIADFS LRMPWAIASG TALRAIAFGG CLTIATMFAP NQLVLASTIR QVAASQVSGE 
NAQLQTVKVW PGHGVSISFY NTKEIIKKIW LDDPSRFVFD VDGCLEGLGK CSSNSTGAGL
IHIRRIETVK IPGLPPAPSG AHMTVITESG STKKSYHFRI VAGSGTPEYS QIEIIGDTPS
KPEEVKPKVS YTALSDSRHI AKGMQVALKN QWVTTDSKLW KRLNQLVELR SQGEELVVAA
STAGVSMQLV EKLMLLGGKR LLEIPPQRNN PLTTKNPGKT IFK