Gene Ava_C0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0040 
Symbol 
ID3678116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp60778 
End bp61554 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content39% 
IMG OID637715124 
Producthypothetical protein 
Protein accessionYP_320318 
Protein GI75812701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.761617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAC CTAAGTCTAA ATCTCAACCA GCTCGGCTCC TCAGTTATGG GCAATCTACG 
TCCACACCTA TTGCAATGGC GATCGCCGTA ACAGCAGGAG GAACTATCTT ATCTACCCTA
TTGCAAATAA TAAATATTGG CATGAGTGCT AGCACAAATC ATCATGTCAA AGGCATGACG
ATAGTTCAAC TCCAAGATGG GTCTATTTCA CCTGGTAAAT TTGCTGCTCC CAACGAACGC
GAAGCCGAAA CTATCAAACG CTTTATCTCA GATAGCATGA TTAAAATGTT CGGATGGAAC
GGAATAATCG AAGCAACAGA GAATGGCGAA AATGTTACTA AACCTGATAG GGGAATAGAT
ATTCAAACAA CAAAAAATAG TAGAAAAAAA ATTCCCACTA GAGCCTGGGA AGCTGCATTT
GCACTATCTG AAAATCAAGA TTTCCGGGCA AACTTTCTCA AGAAATTAGC AGAAATCGTT
CCAAGTGGTG TATTTAACGG TGAAGTTCAA GTTTCACTCG TCACCCGCCA TATCTCTGAA
CCCAGAAAAA TCAAGGATGG ACAGTGGGAA GTTGATTATA TCGCTACGCT CGTCAGCTTT
AATAGGAACG AAAACCAAGG CAAAGGAATT GCATTTAACA AAACAATTAC TGTCGAAGCT
GTCGATACTC CCAAGTTACC AAATAAGCCA ACTGAACTCG ATAAGAAAAT TTATTTAATA
CGAGAACCAG GTTTAGAAAT TACTCAAATC GTTGATTATA ACCTCGGTAA GAAATAA
 
Protein sequence
MLKPKSKSQP ARLLSYGQST STPIAMAIAV TAGGTILSTL LQIINIGMSA STNHHVKGMT 
IVQLQDGSIS PGKFAAPNER EAETIKRFIS DSMIKMFGWN GIIEATENGE NVTKPDRGID
IQTTKNSRKK IPTRAWEAAF ALSENQDFRA NFLKKLAEIV PSGVFNGEVQ VSLVTRHISE
PRKIKDGQWE VDYIATLVSF NRNENQGKGI AFNKTITVEA VDTPKLPNKP TELDKKIYLI
REPGLEITQI VDYNLGKK