| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0033 |
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| Symbol | |
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| ID | 3678109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007412 |
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| Strand | + |
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| Start bp | 51340 |
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| End bp | 53223 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637715117 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_320311 |
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| Protein GI | 75812694 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.590524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTCAAA AGCCAAAGCC CAGAGTAATG CCTGGGATAT GCAGACAGAC ACACGACATT
TTGGAAGGTA TAGTCTCCAC TAGCAGTAAT ATGTCTAAAG CCGAACCACA GTTCAGGATG
GAATCAGAAC AAGACAAACC GCACAAACCC CGAATTGACC CGACCATTCA ATGGCAGTCC
ATTCCCTGGA AGAAGCTGGA ACGTCGAGTT TACAAGCTGC AAAAAAGAAT ATACCAAGCC
GCGAATCGTG AAGATGTCAC TACAGTTCGC CAGCTTCAGA AAACCCTACT CAAGTCCTGG
TCAGCAAAAT GTATTGCGGT CAGAAAGGTA ACTCAGGATA ATCAAGGGAA AAAGACGGCT
GGGGTAGATG GTGTCAAACT ATTAACACCC CACCAACGTT TGCAACTGGT TAAACGTCTC
AAACTCTCTT CCAAAGCAAA TGCTGTGCGA AGAGTCTGGA TACCAAAGCC TCTAACCCAA
GAAAAAAGAC CTCTGGGTAT TCCCACAATG TATGACCGTG CATTGCAAGC CTTAGTCAAA
ATGGCACTAG AACCCGAATG GGAAGCACGT TTTGAACCTA ATTCTTATGG CTTTCGACCA
GGGCGTTCGG TGCATGATGC AATTAGTGCA ATTTATCTTA ATATCAAGCA AAAGGCAAAG
TATGTGCTAG ATGCTGATAT TTGCAAGTGC TTTGAACGCA TCAACCATGA AGCATTATTG
ACAAAACTGA ACACATTTCC CAGCCTACGC CGTCAAATCA AAGCATGGCT CAGGGCTGGG
GTGTTAGATG GAGATAGTTT ATTTCCTAAC CTGGAAGGGA CACCACAAGG AGGCGTTATA
TCTCCTTTGC TGGCAAATAT TGCCTTACAT GGGTTAGAAA ATCAGATTAA GATGGCATTT
CCGCGAATAG ACCGCAAAAT TAATGGTAAG AAGCGGACAA TTCGACCACC AGCCTTAATC
AGATATGCAG ATGACTTTGT GGTCATCCAT GAAGACCTCT CCATAGTTCA AAAATGTCAA
ACTCTAATTG CTGATTGGTT AAAAGGCATC GGACTAGAGT TAAAACCAAG TAAAACATCT
TTAACTCATA CTTTCCAATC TTATGAAGGA AAATTGGGTT TTGACTTTCT CGGATTTCAT
ATTAGGCAAT ATCCCGTAGG AAACTACCTA AGTGCCAAAA ATTCGTATGG TCAGTTACTT
GGATTTAAAA CCCTGATTAC TCCAAGCAAG GATAAGTTGA AACAGCATTT GCTTCACATC
GCCCGAATAA TTGACACCCA TGCTCTCTCT CCACAAGAAA CTCTCATCAG TAAATTAAAT
CCTGTGATCA AAGGGTGGGC AAACTTTTAT TCTATCGGTG TCAGTAGCAG AGCTTTTTCA
AAAGCGGACT TTTTAACTTA TCAAAAACTG CGTGCTTGGG CTACTAATAG ATGTACTCAC
AGTAGTAAGC ACGAAATTGC TAACAAATAC TGGAGAGTAG CTCAAACAAA TAAATGGTGT
TTTAGTACAC CTGATGGTCA TCAGCTTATT AAGCACAGTG ATACCAAAAT TATCAGACAC
GTCAAAGTGA AAGATAATCG CAGTCCCTAC GATGGAGATT GGGTTTACTG GAGTTGCAGA
ATGGGTCATC ACCCAGAAGC GCCTACAACA GTTGCAACTT TATTAAAAGA GCAACAAGGT
AAATGCGCTC ATTGCGGACT CTTTTTCCGT GATGGAGATT TGATGGAAGT TGACCATGTT
ATTCCTAAAT CTAGAAAAGG GAAAAACTCT TACAACAACC TCCAATTACT CCACCGCCAT
TGTCACGATA CTAAAACTGT TACAGATGGG TCAATCTCAC GTTCAGTTTT AACACAGGAT
TATCTAGAGG CTCATCCCTT TTAA
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| Protein sequence | MCQKPKPRVM PGICRQTHDI LEGIVSTSSN MSKAEPQFRM ESEQDKPHKP RIDPTIQWQS
IPWKKLERRV YKLQKRIYQA ANREDVTTVR QLQKTLLKSW SAKCIAVRKV TQDNQGKKTA
GVDGVKLLTP HQRLQLVKRL KLSSKANAVR RVWIPKPLTQ EKRPLGIPTM YDRALQALVK
MALEPEWEAR FEPNSYGFRP GRSVHDAISA IYLNIKQKAK YVLDADICKC FERINHEALL
TKLNTFPSLR RQIKAWLRAG VLDGDSLFPN LEGTPQGGVI SPLLANIALH GLENQIKMAF
PRIDRKINGK KRTIRPPALI RYADDFVVIH EDLSIVQKCQ TLIADWLKGI GLELKPSKTS
LTHTFQSYEG KLGFDFLGFH IRQYPVGNYL SAKNSYGQLL GFKTLITPSK DKLKQHLLHI
ARIIDTHALS PQETLISKLN PVIKGWANFY SIGVSSRAFS KADFLTYQKL RAWATNRCTH
SSKHEIANKY WRVAQTNKWC FSTPDGHQLI KHSDTKIIRH VKVKDNRSPY DGDWVYWSCR
MGHHPEAPTT VATLLKEQQG KCAHCGLFFR DGDLMEVDHV IPKSRKGKNS YNNLQLLHRH
CHDTKTVTDG SISRSVLTQD YLEAHPF
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