Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0029 |
Symbol | |
ID | 3678105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 46864 |
End bp | 47442 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637715113 |
Product | hypothetical protein |
Protein accession | YP_320307 |
Protein GI | 75812690 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.931717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.197929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAAAA CACCGGAATA TCCAATTGTT GTTATTCCAG AGTTAGTTAA AGAGAAAAAA CAGTTTACCC CATTAGTTTT TCCATCTGGA CAAGGAGATG CACCAATTGG GGCAAGTGAG GGGTTGTTTG AAAATGTTCT CAAACATTAT TTTGGTGAAA TTGTTTCTCC CCAGCAGGTG ATGTTTCCAC CAGGGCATCA ATTACCATTT ACGGCTGATT TTCTGTTGAT TGAACCAAAT ACTGGCTTAC ACATAGACTT GGAGGTTGAT GAACCTATCT CATTTGCAAC TGGCAAGCCC ACTCACTGTA TCGGCGATGA TGACTATAGA AACAAGTGTT TTGTCGATGC AAACTGGTTG GTTATCCGGT TTGCAGAAGA ACAAGTCTCA TCTCAACCAG AACGCTGTGC TCGATTTATT GCTGGTGCGA TCGCCCAACT AACAGATAAT AATACTTATC GCCAGAAGCT ACTTCATGTA GAGAAAGTTA CTCCTCTGCG CCAGTGGTCT GCACATCAAG CTTCCAGATT AAAGAAAAGT GATTACCGTC AAGGTTATCT TGGTCAGAGG TTACTTTGA
|
Protein sequence | MAKTPEYPIV VIPELVKEKK QFTPLVFPSG QGDAPIGASE GLFENVLKHY FGEIVSPQQV MFPPGHQLPF TADFLLIEPN TGLHIDLEVD EPISFATGKP THCIGDDDYR NKCFVDANWL VIRFAEEQVS SQPERCARFI AGAIAQLTDN NTYRQKLLHV EKVTPLRQWS AHQASRLKKS DYRQGYLGQR LL
|
| |