Gene Ava_C0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0029 
Symbol 
ID3678105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp46864 
End bp47442 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content42% 
IMG OID637715113 
Producthypothetical protein 
Protein accessionYP_320307 
Protein GI75812690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.931717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.197929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA CACCGGAATA TCCAATTGTT GTTATTCCAG AGTTAGTTAA AGAGAAAAAA 
CAGTTTACCC CATTAGTTTT TCCATCTGGA CAAGGAGATG CACCAATTGG GGCAAGTGAG
GGGTTGTTTG AAAATGTTCT CAAACATTAT TTTGGTGAAA TTGTTTCTCC CCAGCAGGTG
ATGTTTCCAC CAGGGCATCA ATTACCATTT ACGGCTGATT TTCTGTTGAT TGAACCAAAT
ACTGGCTTAC ACATAGACTT GGAGGTTGAT GAACCTATCT CATTTGCAAC TGGCAAGCCC
ACTCACTGTA TCGGCGATGA TGACTATAGA AACAAGTGTT TTGTCGATGC AAACTGGTTG
GTTATCCGGT TTGCAGAAGA ACAAGTCTCA TCTCAACCAG AACGCTGTGC TCGATTTATT
GCTGGTGCGA TCGCCCAACT AACAGATAAT AATACTTATC GCCAGAAGCT ACTTCATGTA
GAGAAAGTTA CTCCTCTGCG CCAGTGGTCT GCACATCAAG CTTCCAGATT AAAGAAAAGT
GATTACCGTC AAGGTTATCT TGGTCAGAGG TTACTTTGA
 
Protein sequence
MAKTPEYPIV VIPELVKEKK QFTPLVFPSG QGDAPIGASE GLFENVLKHY FGEIVSPQQV 
MFPPGHQLPF TADFLLIEPN TGLHIDLEVD EPISFATGKP THCIGDDDYR NKCFVDANWL
VIRFAEEQVS SQPERCARFI AGAIAQLTDN NTYRQKLLHV EKVTPLRQWS AHQASRLKKS
DYRQGYLGQR LL