| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0027 |
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| Symbol | |
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| ID | 3677792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007412 |
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| Strand | - |
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| Start bp | 45083 |
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| End bp | 45982 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637715111 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_320305 |
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| Protein GI | 75812688 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.618912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0626425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGCCT CAGACTTGTT AGTTATTGAC TTTGCTCAAA AGGATGACGT GCTAAAGCTT
TACCCTGAAG CGCCCCTACT TTCCAGCGAC AAAGCTCAAT GGGATGGTAT TCAACTGCAA
TATCATCGGC ATCCGCCACA TCAGCTTTCA GAAAATCATT CCAAGCAGCA TCGCATTATC
ATTCACGATC GCAGTCCTTC GCCGCCAATG GTTGAAGAGA TGATCGAACA TCGCTTTCAA
AAGCGGCAAT TTGGGTATGG CGATGTGACG GTTGTGCCAG CTGATGTCCT AAATTCGGCT
TATTGGAACA CCGAGTACGA ATTTATTACC CTCAGTTTTG AGGCGAGGAC GTTTGCACGT
CATACCTTCG ATCTGACAAC TGCCACTGAT ATCGAGCTTG TCCCCAGTTT CAGCAAACCT
GACCAGCTGA TTTACAGTCT TGGCTTCGCG CTCAAGTCAG AGCTGGAGTC TAGCGGAGTT
GGCAGTCGTC TCTATATTGA TTCGCTAACA GCTGCTTTGA TGACTCATTT GTTACGGCAT
TACTCAGCCC AAAGATCCAT CTCTAGACCT CAGAGTGGTT TAGCCAAATG CCAATTGCAG
AAGGTGATTG ATTTCATTAA TCAAAACCTT GAACAGGACT TGGCACTTGC GGAACTAGCA
GCCATTGTGC AAATGAGTCC GAGTTATTTT TCAACGTTAT TCAAACATTC AACCGGGTTA
GCACCGCATC AGTATGTGAT TCAGTGCAGA GTAGATCGTG CCAAGCAATT GCTACGACAA
AGTAACCTAA CGATCGCAGA AATTGCCTAC AGTCTTGGCT TCACCCATCA AAGCCACCTC
AGCCGACACT TCAAACGATT GGTGGGTGTA AGTCCCAAAG TATTTATTAA AAGTCAGTAA
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| Protein sequence | MLASDLLVID FAQKDDVLKL YPEAPLLSSD KAQWDGIQLQ YHRHPPHQLS ENHSKQHRII
IHDRSPSPPM VEEMIEHRFQ KRQFGYGDVT VVPADVLNSA YWNTEYEFIT LSFEARTFAR
HTFDLTTATD IELVPSFSKP DQLIYSLGFA LKSELESSGV GSRLYIDSLT AALMTHLLRH
YSAQRSISRP QSGLAKCQLQ KVIDFINQNL EQDLALAELA AIVQMSPSYF STLFKHSTGL
APHQYVIQCR VDRAKQLLRQ SNLTIAEIAY SLGFTHQSHL SRHFKRLVGV SPKVFIKSQ
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