Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0025 |
Symbol | |
ID | 3677790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 43044 |
End bp | 43667 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637715109 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_320303 |
Protein GI | 75812686 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0121631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTT TGCACCTTGA TTCTAGCCCA CGCGGCGAGC GCTCTATCTC ACGCTCCTTA ACCCAACAAT TTGTGAGTTT GTGGAAACAA ATGCATCTAG ATGTTCCTGT CATTTATCGC GATTTAGGAC GTTATCCAGT ACCCGCGATC GATGAAGCGT GGATTGCTGC TGCGTTTTGT CCTCCAGCTC AACTCACTCC AGAATTACAA TCTGCCTTGA TGATTTCCGA TGAGTTGATT GCTGAACTGC TGGCGGCAAA CCTCTATATC TTTGGCATTC CTATGTACAA CTATAGTGTA CCTGCCAGTT TCAAAGCATA CATCGATCAG ATTGTGAGAG TCAGACGGAC GTTTGTGGTG AGTGCTGATG GTTACGAAGG ACTGTTAAAA GATAAAAAAG TGCTGGTAAT TACAACACGA GGCGGAAGCT ATGCAGGCGA ACCACTCGAT TTTCAAGAGC CTTATTTGCG TGCAGTGTTT GGCTTCATTG GTATAACTGA TGTCACGTTT ATCCATGCCG AAAATCTGGC AATCGGGTCT GAAGAACGAC AACTAGCGAT TGCAACTGCT CATGAAGCCA TTCAACAAGT TGTAAAAACT TGGCAATCTA GTACCTGCAT CTGA
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Protein sequence | MKLLHLDSSP RGERSISRSL TQQFVSLWKQ MHLDVPVIYR DLGRYPVPAI DEAWIAAAFC PPAQLTPELQ SALMISDELI AELLAANLYI FGIPMYNYSV PASFKAYIDQ IVRVRRTFVV SADGYEGLLK DKKVLVITTR GGSYAGEPLD FQEPYLRAVF GFIGITDVTF IHAENLAIGS EERQLAIATA HEAIQQVVKT WQSSTCI
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