Gene Ava_C0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0025 
Symbol 
ID3677790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp43044 
End bp43667 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content45% 
IMG OID637715109 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_320303 
Protein GI75812686 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0121631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTT TGCACCTTGA TTCTAGCCCA CGCGGCGAGC GCTCTATCTC ACGCTCCTTA 
ACCCAACAAT TTGTGAGTTT GTGGAAACAA ATGCATCTAG ATGTTCCTGT CATTTATCGC
GATTTAGGAC GTTATCCAGT ACCCGCGATC GATGAAGCGT GGATTGCTGC TGCGTTTTGT
CCTCCAGCTC AACTCACTCC AGAATTACAA TCTGCCTTGA TGATTTCCGA TGAGTTGATT
GCTGAACTGC TGGCGGCAAA CCTCTATATC TTTGGCATTC CTATGTACAA CTATAGTGTA
CCTGCCAGTT TCAAAGCATA CATCGATCAG ATTGTGAGAG TCAGACGGAC GTTTGTGGTG
AGTGCTGATG GTTACGAAGG ACTGTTAAAA GATAAAAAAG TGCTGGTAAT TACAACACGA
GGCGGAAGCT ATGCAGGCGA ACCACTCGAT TTTCAAGAGC CTTATTTGCG TGCAGTGTTT
GGCTTCATTG GTATAACTGA TGTCACGTTT ATCCATGCCG AAAATCTGGC AATCGGGTCT
GAAGAACGAC AACTAGCGAT TGCAACTGCT CATGAAGCCA TTCAACAAGT TGTAAAAACT
TGGCAATCTA GTACCTGCAT CTGA
 
Protein sequence
MKLLHLDSSP RGERSISRSL TQQFVSLWKQ MHLDVPVIYR DLGRYPVPAI DEAWIAAAFC 
PPAQLTPELQ SALMISDELI AELLAANLYI FGIPMYNYSV PASFKAYIDQ IVRVRRTFVV
SADGYEGLLK DKKVLVITTR GGSYAGEPLD FQEPYLRAVF GFIGITDVTF IHAENLAIGS
EERQLAIATA HEAIQQVVKT WQSSTCI