Gene Ava_C0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0017 
Symbol 
ID3677782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand+ 
Start bp36162 
End bp36764 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content40% 
IMG OID637715101 
Producthypothetical protein 
Protein accessionYP_320295 
Protein GI75812678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.346176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.0133176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAG CAATTGAACG CGAAATCAAT CAACTCACGC TCAAAGAGTT AAGCTTAGAT 
GCTGCTAAAC TCTGGTCACA GATAGAAGAA GCAAGCGAGT TAGGCGAAGA AGGTAAAGTA 
GAACAACTCG TACAAGAACT TATGGGTGTT CAAGATGGTA TCGAAACCAA AATTGATGCG 
ATCGCCTGGG TAGTAGACCA GTTAAATCTT GACCTTGAAA CCTGGGAAGA AAGAAAAGCA 
CGAGTAGCCG AACTCCACGA TCGGGTAATT TCACGTCGTA AAACTCAACT TGAACAAATC 
AAGCGTACCC TGATCCATCT GCACGAGATT GGATTAATCA GTGACAAAAA TATTGGTAAG 
GAAAGGGTAA TTGAAATCAG GGATAACCCA CCCAAAGTCG CTAATTTACT AGTAGAGGTA 
GACGATCAAG ATTTTCCTGA TGAATTTAGA GTTATTAAGT ACCAAGCTAA TAATAAGGCA 
ATTCTTGAAG CCTATAAATC TGGTAAAGAT ATTAGCGATG TTGCTGAGAT AACTATTGGC 
AAACAAGTAC GGTTTAAGGT GCAATCAGCT ACTAAGGGGC GCAACAAGAA AAACCACAAC 
TAA
 
Protein sequence
MTQAIEREIN QLTLKELSLD AAKLWSQIEE ASELGEEGKV EQLVQELMGV QDGIETKIDA 
IAWVVDQLNL DLETWEERKA RVAELHDRVI SRRKTQLEQI KRTLIHLHEI GLISDKNIGK 
ERVIEIRDNP PKVANLLVEV DDQDFPDEFR VIKYQANNKA ILEAYKSGKD ISDVAEITIG 
KQVRFKVQSA TKGRNKKNHN