| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0012 |
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| Symbol | |
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| ID | 3677777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007412 |
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| Strand | + |
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| Start bp | 31828 |
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| End bp | 32730 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637715096 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_320290 |
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| Protein GI | 75812673 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.465454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0116121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTTT CTCCAATTGA CCCCATCAAT GCTTATGTGG GTGCAGATAT TTCTCGCATT
GGCACAGAAC AACGAGAATT AATTGCTAGA CAATGGGGAT TAGATCAACC GATGACTACC
CGCTTTTTTC TTTGGTTACA GCAATTTCTC CAAGGAAATT TAGGCACTTC GATAATTTTT
AATCAATCAG TCTCAAATGT CATTGCAACT CGCTTTCAAA CATCTTTAGC ATTGATGGCG
TTAGCGTGGC TAATATCAGG TGTTTTGGGC ATTACTTTAG GTCTTGTGGC AGGGGCAAAT
GCAGGTTCAA TAATAGATAG AATCATTCGC CTTTATGCCT ATACTTTGGC ATCTAGTCCA
ACTTTTTGGA TTGGGTTGCT GCTACTAAGT TTATTTGCTG TGCAATGGCG ACTAGCCCCT
ATTTGTTGTG CTGCACCTAT TGGTGTTTTG CTAGAAGATG TGACATTTTG GCAACGCCTA
CATCATCTAT TTTTACCGGC TTTAACTTTA AGCTTAATTG GGATTGCTAG TATTGCTCTG
CACACCCGTG AAAAACTCAT TGAAATTCTA CATAGCAACT ATGCTTTATT TGCTTTTGCT
CAAGGTGAAA CCAAAATGGG CTTTATTATC CATCATGGAT TGCGGAATAT TGCACTACCA
GCCATTACAT TACAATTTGC TAGTTTGAGC GAATTATTTG GCGGTTCTGT CCTAGCGGAA
AGAGTATTTG GATACCCAGG ATTAGGTGAT GCTACTACAC AGGCAGCTAT GCGGAGTGAT
GTGCCATTAC TAGTGGGAAT TGTGTTATTT AGTGCTTTAT TTGTTTTCAC AGGTAACTTT
TTAGCTGATC TGGCTTATCA GCTAATCGAT CCGCGTATCC GTATTGGGAA ATCTGCATCA
TGA
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| Protein sequence | MSFSPIDPIN AYVGADISRI GTEQRELIAR QWGLDQPMTT RFFLWLQQFL QGNLGTSIIF
NQSVSNVIAT RFQTSLALMA LAWLISGVLG ITLGLVAGAN AGSIIDRIIR LYAYTLASSP
TFWIGLLLLS LFAVQWRLAP ICCAAPIGVL LEDVTFWQRL HHLFLPALTL SLIGIASIAL
HTREKLIEIL HSNYALFAFA QGETKMGFII HHGLRNIALP AITLQFASLS ELFGGSVLAE
RVFGYPGLGD ATTQAAMRSD VPLLVGIVLF SALFVFTGNF LADLAYQLID PRIRIGKSAS
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