| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0004 |
|---|
| Symbol | |
|---|
| ID | 3677796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007412 |
|---|
| Strand | - |
|---|
| Start bp | 11297 |
|---|
| End bp | 12241 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637715088 |
|---|
| Product | phosphopantetheine-binding |
|---|
| Protein accession | YP_320282 |
|---|
| Protein GI | 75812665 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0557095 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTCCAA ATCCTGATGA ATGGTCATAT CATCCACCTA TTGGTACTCC AATTGCGAAC
ACGCAAATTC ACATTCTAGA TTCACACCTA AAACCAGTTC CCATTGGCGT TATTGGTGAA
CTTTATATTG GGGGAGTTTC TTTAGCAAGA GGTTATTTGA ACCGACCAGA TTTGACCAAT
GAGAGATTTA TTCCTGACCC ATTTAGTAAA GAAACTGGTA GCCGTCTCTA TAAAACTGGA
GATTTAGCAC GCTATTTATT AGATGGGAAT ATTGAATATC TAGGACGCAT CGACAACCAA
GTTAAAGTTA GAGGTTTTCG GATTGAATTG GGTGAAATTG AAGCTGTATT AAATCAGCAT
CCTGATGTAA ATAAAGCAGT TGTTTTGGCT CAAACAGACA CCACAAATCA GCAGCGTTTG
ATTGCTTATA TTGTATCTAA TCAAGCAGTA CAGGAAGCAA CGAGTGATTT TCATAGCTTC
TTACAAAAAA AGCTACCGGA GTACATGATT CCATCAGCTT TTATTTTCCT AAAATCACTA
CCTTTAACAT CAAATGGAAA AATAGACCGC CAAGCATTAC TGAATATCAA TTTAGATGAT
TATCTCTTCA AGGCTAACTT TATAGCACCA CGCACTGCGG CTGAAAAGGT GATTGCAAAT
ATCTGGAAAC AAACGCTTGG TGTGAATCAA ATCGGTATCT ATGATAATTT CTTTGCATTG
GGTGGACACT CGCTGTTAGC TACGCAAGTT TTCTTTAAGC TGAACAAGAT TTTTCAGGTA
GAGTTATCGC TATCTCAACT ATTTGAAACA CCGACAGTTG CAGGGTTATT AGAGGTGATT
ACACAGCAAT TAGGTGGAGT TGATGTTGTG GAAAATATTG CTCAAATATT GTTAGAAATT
CAACAGTTTT CACCGGAGGA GGTGAGGGAG ATGCTTGATA AGTAA
|
|---|
| Protein sequence | MSPNPDEWSY HPPIGTPIAN TQIHILDSHL KPVPIGVIGE LYIGGVSLAR GYLNRPDLTN
ERFIPDPFSK ETGSRLYKTG DLARYLLDGN IEYLGRIDNQ VKVRGFRIEL GEIEAVLNQH
PDVNKAVVLA QTDTTNQQRL IAYIVSNQAV QEATSDFHSF LQKKLPEYMI PSAFIFLKSL
PLTSNGKIDR QALLNINLDD YLFKANFIAP RTAAEKVIAN IWKQTLGVNQ IGIYDNFFAL
GGHSLLATQV FFKLNKIFQV ELSLSQLFET PTVAGLLEVI TQQLGGVDVV ENIAQILLEI
QQFSPEEVRE MLDK
|
|---|
| |