Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0001 |
Symbol | |
ID | 3677793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 399 |
End bp | 1703 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637715085 |
Product | major facilitator transporter |
Protein accession | YP_320279 |
Protein GI | 75812662 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.51078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00413697 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCACAAT TTGCTGTAGC CCAAAGCATG AGAGTTTTTA CTTTCATTTG GTTTGGACAA CTAGTTTCAC TGCTGGGTTC GAGTCTCACA GGGTTTGCAC TAGGAGTTTG GGTTTATCAA AGAACTGGAT CAGTTACACA GTATGCACTC ATTTCTTTAT TCTCACTACT ACCAGGTCTT TTAATAGCAC CATTAGCAGG CGTGTTAGTA GACAGATGGG ATCGACGCTG GCTGATGATT TTTAGTGATG CTGGAGCAGG TTTAGGTAGT CTGATAATTG CCCTGTTGCT GTGGCTGGGT CAACTCCAAG TTTGGCAAAT TTACCTTATT GTTGCCATCA GTTCAATGTT CAGTGCCTTC CAGTGGCCTG CTTATGCTGC TGTCACAACA TTACTCGTTC CTAAACAGCA CTTAGGGCGT GCTAATGGAA TGGTACAGTT TGCAGAAGCA GTATCACGGT TAATTGCACC AGCCTTAGCA GGAATACTAG TAGTCTCAAT CAATCTTCAA GGTGTCATAT TACTAGATAG TGTGACGTTT GTTTTGGCGA TCGCCACGCA GATGCTCGTT CGATTCCCTA AGATCAAAAC TACGATCGCA GATGTAGAGA AAAACAAATC CCTGCTAGGG GAGGCGGTGT CTGGCTGGAA ATACATCACT ACTCGACCCG GACTACTGGC ATTATTGATA TTTTTTGCTA TCAAAAATTT TTTGGTAGGA ACTGTTAACG TACTGATTAC ACCTTTAGTT CTATCTTTTA CTTCCACTAC TGTCTTAGGC ACTGTACTAT CAATTGGTGG CAGTGGTATG CTCCTTGGCA GTTGTGTTAT GAGCTTTTGG GGTGGTTCAC GGCGACGTAT TCATGCTGTA CTGGGCTTTA CCCTGTTGGG TGGGTTATCT ATTATCATGG CTGGAATCAA ACCAGCAGCA CCAGTTTTCT TTGCAGCTGC GTTTACCTAC TTCTTCGGCT TCCCCATTGT CAACAGTTGC GATCAAGCTA TTTGGCAAAG CAAAGTTGAG CTTGCTGTCC AGGGACGAGT TTTTGCTTTG CGACGTATGC TTACTTGGGG ATCTCTACCG CTTGCTAGCC TTGTGGCAGG CCCCTTAGCC GATCATGTCT TTGAACCTTT ACTTGTTCCA GGAGGGTTAT TAGCCGGAAA CCTTGGACAG ATTATTGGTG TAGGGAAAGG ATACGGCATT GCCCTATTAT TTATTCTTAT GGGAATACTG ACTATGTTAG CCACAGTAAG CTTCTATTTA TACCAGCCTC TACGTTTATT AGAAACTCAA TTGCCTGATG CGTAA
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Protein sequence | MPQFAVAQSM RVFTFIWFGQ LVSLLGSSLT GFALGVWVYQ RTGSVTQYAL ISLFSLLPGL LIAPLAGVLV DRWDRRWLMI FSDAGAGLGS LIIALLLWLG QLQVWQIYLI VAISSMFSAF QWPAYAAVTT LLVPKQHLGR ANGMVQFAEA VSRLIAPALA GILVVSINLQ GVILLDSVTF VLAIATQMLV RFPKIKTTIA DVEKNKSLLG EAVSGWKYIT TRPGLLALLI FFAIKNFLVG TVNVLITPLV LSFTSTTVLG TVLSIGGSGM LLGSCVMSFW GGSRRRIHAV LGFTLLGGLS IIMAGIKPAA PVFFAAAFTY FFGFPIVNSC DQAIWQSKVE LAVQGRVFAL RRMLTWGSLP LASLVAGPLA DHVFEPLLVP GGLLAGNLGQ IIGVGKGYGI ALLFILMGIL TMLATVSFYL YQPLRLLETQ LPDA
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