| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_A0031 |
|---|
| Symbol | |
|---|
| ID | 3677982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007411 |
|---|
| Strand | + |
|---|
| Start bp | 32042 |
|---|
| End bp | 33127 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637715083 |
|---|
| Product | phage integrase |
|---|
| Protein accession | YP_320277 |
|---|
| Protein GI | 75812659 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTTA CTAATATTGA GGTTAGCTCC GTAGAAATTC TTTCTCTCAA CCCTGTTAAG
GTTGTAACGT CAAATACTTC GCAACAAGTA ACTCCAGAAT TGGTAGAGGA GGTAATCAGG
CAATATTATT ACCGCACACC TGCCGTAAAT AATGATGAAG AGTTAATCTT AGCTTGGGCT
GGCAGTCAAA ACCGGGAACA AACTAAGCGA AAATACTATC GTTTTGGTCA AAAATTACTA
GATTGGGTTC GTCATCAAGG AATACCTGAT TTAAGATTGC TACAGCAGCC AAAGCTACTT
GAATTTATTG CCTCTTGGGG TGAGGTTTCC CCTTATACTA AATCTAACCA GATTTTGATG
CTACGGTCGC TGTGGAGTTA CGGATCTGCT GAGAATATTG GCTATTTTTT GCGGAATATT
GCTAGTACCA TAAATTACGA TAATTTCAGT AATTTACCCA AAGCAGAGCG TTATTTAGAA
GATTGGGAGA TGGCGAAACT TGCTGATGCT GCCAAGCAGT TGAGTGGGAA GCACTGGCTG
GTTTTTTGTT TGCTTTTTTA TAGTGGAATG CGGGTAGGTG AAGTGGGTCG GGTGACAGTT
CCAGGTGATG AAGCAGGTAA ACCGAGGGAA GATTTTCCGG GTTTATATTG GCACAACTTT
AAATGGCAAT TTGACCCAGC GACGGATGAT AGGCAACGTG GATATTACAC TATCAAGTTT
CGGGGTAAGG GTGGGAAGTA CCGAGAAATT GGGTTGGACT ACGAGACTTC TAAGTTGCTA
AAAAAATACC GGGGGATGGC TAGTGACAAG ATGCCAGTAT TTCCCAATAT GTCGCCTGAC
CCTAAAAAAC GGGGGTTGCC GTTAAGCGAT CGGGCGATTA AAAGGTTGAT TCAGGATATC
TCTGAGGTGG CGAAGGTAAA GTTTTCTTGT CACTGGCTAA GGCATTCCCA CGCAACGAGG
GCGGTTGATA GTAAACCACT GTTTGAGGTG CAAGACCAGT TGGGGCATAG TAAGAGTGAC
ACTACCAAGA CGTATGTTCG CCCCAAAAAG GATGCAGGGA CAGGTACTAT TTTGCCGAGG
TTTTGA
|
|---|
| Protein sequence | MDVTNIEVSS VEILSLNPVK VVTSNTSQQV TPELVEEVIR QYYYRTPAVN NDEELILAWA
GSQNREQTKR KYYRFGQKLL DWVRHQGIPD LRLLQQPKLL EFIASWGEVS PYTKSNQILM
LRSLWSYGSA ENIGYFLRNI ASTINYDNFS NLPKAERYLE DWEMAKLADA AKQLSGKHWL
VFCLLFYSGM RVGEVGRVTV PGDEAGKPRE DFPGLYWHNF KWQFDPATDD RQRGYYTIKF
RGKGGKYREI GLDYETSKLL KKYRGMASDK MPVFPNMSPD PKKRGLPLSD RAIKRLIQDI
SEVAKVKFSC HWLRHSHATR AVDSKPLFEV QDQLGHSKSD TTKTYVRPKK DAGTGTILPR
F
|
|---|
| |