| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_A0029 |
|---|
| Symbol | |
|---|
| ID | 3677980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007411 |
|---|
| Strand | + |
|---|
| Start bp | 29751 |
|---|
| End bp | 31100 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637715081 |
|---|
| Product | DnaB helicase |
|---|
| Protein accession | YP_320275 |
|---|
| Protein GI | 75812657 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGA ATCTAAATTT TGGTGATAGT AACAAGCTGC CTCCCCAAAA TATTGAAGCA
GAAGAGGCCA TTTTGGGTGG TATCTTGCTC GACCCAGATG CAATCAGCAG GGTGAGTGAT
CGCCTTGTTC CCGAAGCTTT TTACATTAGC GCTCACAAAG ATATCTATCA AGCAGCTGTC
AGGCTCCACG CACAAGATAA ACCCACAGAC TTGCTCTCGG TCACAAGTTG GCTGACCGAT
CGTGATTTAC TATTTCGCAT TGGCGGGAGA AATAAATTAG CAACCCTTGT AGACCGCACA
GTATCAGCTG TTAACATCGA TGCCTTAGCA GTGTTGGTGA TGGAAAAATA TCTGCGGCGG
GAATTAATCA AGGCTGGCAA TGAGATTGTA CATTTGGCAC ACGACCAAGA AGAAGAAATA
GCCAAACAAT TAGAGACGGC TGAATCAAAA ATTTTGGAGA TAAATAATAG TGCAATTGCA
TCAACATCTC AGCCAATTCA TCTCAGCGAT ATCTTAATAA ACGCCTACTC CAGCATTGAA
GAAAAAAGTA TGGGTATATC CCCACCTGGG GTAAAGACTG GGTTTTATGA CCTAGATGCA
ATGATAGGAG GATTTAAAAC GGGAAAGCTG ATAACAATTG CTGGTCGTCC GGCAATGGGA
AAATCATCAT TTCTAGGCAA TTTAGCCTTT AATATCTCCT CACTTGAAAA GTTACCAACT
GTTATTTTTA GCCTTGAAAT GACCAAAGAA GAATGGGGAG ATAGGTTTTT ATCCCAAGAT
GCAAGAATTG ATTCAAGCTA TTTGCAACAG GGCAAGATTA TTAAACACCA GTGGGAACCT
TTGGCGCAAT CAATCGGTAG GTTAAGCGAG TTGCCTATTT ATATTGACGA TTCGCCCGTG
ATAACTGTCA ATTCAATTCG TTCAAAAGTT AAGCGAATTG TTGCAGAATA CGGTCACATT
GGGATGGTTG GTATTGATTA TTTGCAATTA ATGGAAGGGA CGGATGGTGA TAGTTACAAC
CTCGCTTTTC AGATCGGAAA AATCACCAGA CAGTTAAAGC AATTAGCACG CGAGTGCAAC
ACAACTATTG TCATGTTGTC ACAGCTAAAT CGTGGTGTAG AGAGCCGCAC TATCAAGCGT
CCTATGATGT CAGATTTGCG CGAATCAGGG CGAATTGAGG AAGATTCGGA TTTAATACTG
CTTCTTTATC GGGATGAATA CTACTACCCC GATACGATTG ATAGAGGTAT TGCAGAGGTA
ATTATCGCCA AAAATAGGGG CGGGCCAACA GGAACAACAA AACTGCTGTT TGATGCACAG
TTTACTCAGT TCAAAAATTT GGCACGTTAG
|
|---|
| Protein sequence | MSENLNFGDS NKLPPQNIEA EEAILGGILL DPDAISRVSD RLVPEAFYIS AHKDIYQAAV
RLHAQDKPTD LLSVTSWLTD RDLLFRIGGR NKLATLVDRT VSAVNIDALA VLVMEKYLRR
ELIKAGNEIV HLAHDQEEEI AKQLETAESK ILEINNSAIA STSQPIHLSD ILINAYSSIE
EKSMGISPPG VKTGFYDLDA MIGGFKTGKL ITIAGRPAMG KSSFLGNLAF NISSLEKLPT
VIFSLEMTKE EWGDRFLSQD ARIDSSYLQQ GKIIKHQWEP LAQSIGRLSE LPIYIDDSPV
ITVNSIRSKV KRIVAEYGHI GMVGIDYLQL MEGTDGDSYN LAFQIGKITR QLKQLARECN
TTIVMLSQLN RGVESRTIKR PMMSDLRESG RIEEDSDLIL LLYRDEYYYP DTIDRGIAEV
IIAKNRGGPT GTTKLLFDAQ FTQFKNLAR
|
|---|
| |