Gene Ava_A0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_A0028 
Symbol 
ID3677971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007411 
Strand
Start bp28711 
End bp29751 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content45% 
IMG OID637715080 
Producthypothetical protein 
Protein accessionYP_320274 
Protein GI75812656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATT TATGGAAATT CAGTCCAATC AAGCAAAACA GGGATATCGC ATCTTTTACC 
AATAAAAATA CTATGACACA GCTAAAAATT CAAGGAACAT TCTACCCGCT TCAACATGAA
GAATGGTTGA GAGCCTGCCG GGAATTAACC CCAGCACAAA GAGACGTACT TTACTATCTC
CGTACTCTCG ACCCATACAG CAGTGGACTG GAAGTCTCGC CCGCCCAGAT TGCCAAGGAT
TTATCTACCC CAGAAAAGGT AGTTCACCGC AGCACTATAG GACGCGCCCT CAAAGTTTTA
GACGAGAAAG GGTTTATTGA TATGGAGCTT CTTAAAGTCA AGGTTAACAT TCTACCCAAA
GGCTTGCACT GTTGCCTCAG CACAAGTTGT GCTGAGGCAA CAAGTTGTGC TGAGGCAACA
AGTTGTGCTG AGGCAACAAG TTGTGCTGAG GCAACAAGTT GTGCTGAGGC AACAAGTTGC
GATGAGACAA CAGTGTTGCC TACAGGCAAC TTAGGTGATC ATGACGCAAC AAGCGTGATC
ATGACGCAAC AAGCGCGATC GCTACGCAAC AAGCACGAGC CAGAAGCCTC ACCAGACAAA
GATTCCAGCA CCTCTAAGAT TAATAAGACT TATTTAGATT TTTTAGACTC TCTCTCAGAA
GGCGAGCGAG AGAAATTTTT TGAATTTGGT AAGAAAAAAG CAGCAGAGTT ACCAAAATCC
CCAACACTGC CCCTTAAGTG GATTGAGAAA AACTTTGAGG ATATCCGCTC CCAGTGGTTC
CAAACCCGCG ATGAAAAAAA CCAAAAGTAC AATTTTGCGG CTTACAGCCA AGCGCAGCAT
CAAATGTGGT ACGGACAACT ACAAGCTTTA GTTTGCGGGG CTATTCAATC GGGCGATAAG
GCGAGGCTCG AACAGTTTTT AAAAGATGAT TTTTACAGCA GCTGGCTCAA TTGGGCAAAA
ACTGCCCGCG AGGACGTGCG CGAATTTTTA GCAAGCAACC CGATACCCAC AGAAAACCCA
GTAAAAGCGC AAGTTAAGTA A
 
Protein sequence
MMNLWKFSPI KQNRDIASFT NKNTMTQLKI QGTFYPLQHE EWLRACRELT PAQRDVLYYL 
RTLDPYSSGL EVSPAQIAKD LSTPEKVVHR STIGRALKVL DEKGFIDMEL LKVKVNILPK
GLHCCLSTSC AEATSCAEAT SCAEATSCAE ATSCAEATSC DETTVLPTGN LGDHDATSVI
MTQQARSLRN KHEPEASPDK DSSTSKINKT YLDFLDSLSE GEREKFFEFG KKKAAELPKS
PTLPLKWIEK NFEDIRSQWF QTRDEKNQKY NFAAYSQAQH QMWYGQLQAL VCGAIQSGDK
ARLEQFLKDD FYSSWLNWAK TAREDVREFL ASNPIPTENP VKAQVK