Gene Ava_A0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_A0017 
Symbol 
ID3677960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007411 
Strand
Start bp19055 
End bp19615 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content30% 
IMG OID637715070 
Producthypothetical protein 
Protein accessionYP_320264 
Protein GI75812646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.72938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGTC AGTTCTTACC AGATGAACCT AATCAACCAA CGGAAATAAA AACATCGATT 
ATCAAAATTA GAGGTAAAAC ATTAATATAT GGCAATGTTG TTTATCAAAT ACACAACATT
GCAAGTATTG GGTTGGTCGA TTTGACAACT ACAGTTATAA AGCCAATGCC GAAACTTTTT
GTCGTTTTAC CTATTATTGG GGTCATATTT TTATTTATTA CCTCATACAT AGCAAAACTA
ATAGGATTTT TACTTATAGT TATTGGAGCT TGGTTAATTT ATCAACATAA TCTAAATAAA
ACTAAAACAA CGGAAAGATA TGGAATGACC ATTTATACCA ATAGTGGAAC AAAAACAATT
CTAACCAGTA GAAGTGAAGA TTTTCTTAAG AAAGTTATCT TGACTTTATA CACTGTGATG
AATAGTGATG AGTTAAAAGC TGTTAATTTT AATTTTGAAA CTTTAGATAT GTCTGTTGAT
AATTCAATAA AAGTTGGGAA AAATATTGGT TCTCCTTTAA ACACAGGACA CATTGGCGGA
GATGTTGTAA ACCAAGTTTA G
 
Protein sequence
MLSQFLPDEP NQPTEIKTSI IKIRGKTLIY GNVVYQIHNI ASIGLVDLTT TVIKPMPKLF 
VVLPIIGVIF LFITSYIAKL IGFLLIVIGA WLIYQHNLNK TKTTERYGMT IYTNSGTKTI
LTSRSEDFLK KVILTLYTVM NSDELKAVNF NFETLDMSVD NSIKVGKNIG SPLNTGHIGG
DVVNQV