Gene Ava_B0346 details

Gene Information

• Locus tag: Ava_B0346
• ID: 3677543
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_007410
• Strand: +
• Start bp: 364071
• End bp: 364580
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637715049
• Product: NUDIX hydrolase
• Protein accession: YP_320243
• Protein GI: 75812624
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1443] Isopentenyldiphosphate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.408953
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCAAG ATTTAGAGAT ACTTGACATT GTAGATGAAA GCGATTGCAT TATCGGACAA 
AAGCAACGCT CGGAAATATA TAGTCAAGGG CTGTGCAATT TTAGAGTTGT CAATTCTTTT 
GTAGTTAATT CACTTGGAAA ACTTTGGATA CCTCGCCGTT CTGCCCAAAA ACGAATTTTT 
CCCCTTTGTC TTGATGTCAG CATGGGTGGT CATGTGGAAA GTGGAGAAAC TTACGAAGAT 
GCTCTGCAAC GTGAACTCGA AGAAGAATTA AACCTAGATT TAAACATGGT TAATACGCAG 
TTATTGGGTT ATTTAACACC ATATAAATAT CAAGTTTCTG CTTTTATGAA AGTTTATGAA 
ATTAGATTAG ATTATGAACC AGACTACAAT CAGAATGATT TTATTGAAAG TTTTTGGTTA 
TACCCTTCTG ATTTAATAGA ATGGTTGAAT AAAGGTGAAC CTGCAAAAAG TGACTTGATT 
AAACTTGTGC AGATGTTTTA TGCAAATTAA 

 

Protein sequence

MMQDLEILDI VDESDCIIGQ KQRSEIYSQG LCNFRVVNSF VVNSLGKLWI PRRSAQKRIF 
PLCLDVSMGG HVESGETYED ALQRELEEEL NLDLNMVNTQ LLGYLTPYKY QVSAFMKVYE 
IRLDYEPDYN QNDFIESFWL YPSDLIEWLN KGEPAKSDLI KLVQMFYAN