Gene Ava_B0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0336 
Symbol 
ID3677605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp358661 
End bp359485 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content45% 
IMG OID637715041 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_320235 
Protein GI75812616 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000503068 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATTT GTGGAAAATT GGGTGTAGCG GCGTTGGTGG CGTTGATTGT CGGGTGTTCG 
CCTGTCCAAT CCCAAGTGCC ACCATTAACT GAACTTTCCC CATCAATCAG CGTGCATTTA
CTGCTGGGAA ATCCCAGTGG TGCAACGCCA ACAAAGCTTA CACCTGATAA TTACCTGATG
GTCAAAAATC AATATGCACT CTCCTACAAC AACAGCAAGG GAACTGCTAA CTGGGTAGCT
TGGCAGCTTA ACTCCTCATG GCTAGGGAAC GCAGAGCGTC AAGATAACTT CCGCCCAGAC
AAAACATTGC CTGCGGGTTG GGTGCGAGTG ACTCCTTCTA TGTACTCTGG GAGTGGTTAT
GACCGGGGGC ATATTGCACC TTCAGCAGAC CGCACCAAGA CAACAGAAGA TAATGCGGCT
ACTTTCCTGA TGACAAACAT GATGCCCCAA ACACCCGATA ACAATAGAAA TACGTGGGGA
AATTTAGAAG ATTATTGTCG AGAATTAGTC AGTCAGGGTA AAGAGCTTTA CATTGTTGCC
GGGCCTAATG GTAGTCTTGG CAAACCCCTC AAAGGTAAGG TGACAGTTCC CAAATCCACT
TGGAAGATTG TTGTCGTACT AGATAGCCCA GGCTCAGGGC TTGAAGGTAT TACTGCTAAT
ACTCGCGTTA TCGCAGTAAA TATTCCCAAC GACCCAGAAT TAAATAATGA CTGGAGGGCT
TATAAAGTCA GTGTTGATGA ATTAGAAAGT TTGACGGGTT ATGATTTTTT GTCTAATGTT
TCCCCCAATA TTCAAACAAG TATTGAGAGT AAAGTTGATA ATTAG
 
Protein sequence
MGICGKLGVA ALVALIVGCS PVQSQVPPLT ELSPSISVHL LLGNPSGATP TKLTPDNYLM 
VKNQYALSYN NSKGTANWVA WQLNSSWLGN AERQDNFRPD KTLPAGWVRV TPSMYSGSGY
DRGHIAPSAD RTKTTEDNAA TFLMTNMMPQ TPDNNRNTWG NLEDYCRELV SQGKELYIVA
GPNGSLGKPL KGKVTVPKST WKIVVVLDSP GSGLEGITAN TRVIAVNIPN DPELNNDWRA
YKVSVDELES LTGYDFLSNV SPNIQTSIES KVDN