Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0328 |
Symbol | |
ID | 3677718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | + |
Start bp | 352816 |
End bp | 354165 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637715033 |
Product | DnaB-like helicase |
Protein accession | YP_320227 |
Protein GI | 75812608 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0149353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACTTTA ACCACGATAA CGTTATTCCT TTTTCTGCTT CCCAAGATGT GGATCGCCTA CCGCCACAGA GCATTGAGGC TGAGGAATCT GTACTCGGCG GCATCATGAT TGACCCACAA GCATTTGACC GCATCAGCCA TATCCTTGTC CCTGAAGCTT TTTACGTGAG CGCACACACC ATTATTTACC AAGCATTCAC TCAACTGCGT GCCTCTTTTC AGCCTACAGA TTTACTTTGC TTGACCAATT GGCTCATGGA TCACAATCTT CTGGAGCGCA TTGGCGGACG AAACAAATTA GCAACTTTAT TTGACCGCAC TGTTTCTGCC GTCAATATCG ATGTTCTGGC TGATTTAGTC ATGCAAAAAT ACCGCCGCCG ACAGTTAATC AAAATCGGCA ATGAAATTAT GCAGTTGGGC TACGAAACCC AAACCGACTT AGGACAAATC TTCTCGCAAG CCGAACAAAA AGTTTTCCGC GTCACTCAAA ATTCCTCCGA CGAACAATGC AAAGTTCATC AAGCTGCTGA TATGGCTATT GAACTCTACC AAAAACTGGA GATGGGACAA ATGCAAGGCG ACAAATTTGG CTGGTATGAC TTGGAAGCTA TCACTGGTGG TCTTTATCCC AGTAGTTTGG TGGTAGTGGC TGCTGAGTCT CACATGGGCA AAACCCATTT CATGATTTCC ACTGCTTACG AAATCATGAC TAAGCTCGGT AAGGGTGTTC TCTATGTCAC TCCCGAAATG GATCGCAGTC AAGTCAATGC CCGAATGTTA GCCAGAATTA CAGGTGTTGA CTCTGCCCAC ATTCAAGCCC AAACACAATC TTACTGGCAG CAAGTTGCAC AAGGTGTTTG TCAACTGGCT GAAATGCCTT GGCAGATTTT TGAGCATTCT TCCCCAACTC CCACAATGAT TGCTTCTGCC GTTCGTCGCT CTATTGCTGA AGCGGGTGGT TCTTTGGGTG CTGTGTTTGT GGACTACTTG CAGCAAATTC CTCTGGAGGG GGGCGGCAAT ATGGCCCATG AAGTTGGCAA GATTACTCGC CAGATTCGCG CGATCGCTAA AGAACACAAA ATCCCCGTTT TCTTAGGTTG TCAAATTAAC CGAGGCAACC AAACAACTGC TGACAAACGC CCTAACCGTC ATTTACTCCG CAATTCTGGG GAAATTTTCG AGGTTTGCGA CCAGTTAATT ATGCTTTACC GCGATGCTGT GTATACAAAA GACCCTAGTG ACCAAACTAT CGAGTTGATT GTTGAGAAAA ACCGACTCTA CGGCAAACTC GGCACTGCAA CTATGCTTTG TGATTTTTCT ACTTCTCGGT TTTTGAACTT TGCAAGGTAA
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Protein sequence | MHFNHDNVIP FSASQDVDRL PPQSIEAEES VLGGIMIDPQ AFDRISHILV PEAFYVSAHT IIYQAFTQLR ASFQPTDLLC LTNWLMDHNL LERIGGRNKL ATLFDRTVSA VNIDVLADLV MQKYRRRQLI KIGNEIMQLG YETQTDLGQI FSQAEQKVFR VTQNSSDEQC KVHQAADMAI ELYQKLEMGQ MQGDKFGWYD LEAITGGLYP SSLVVVAAES HMGKTHFMIS TAYEIMTKLG KGVLYVTPEM DRSQVNARML ARITGVDSAH IQAQTQSYWQ QVAQGVCQLA EMPWQIFEHS SPTPTMIASA VRRSIAEAGG SLGAVFVDYL QQIPLEGGGN MAHEVGKITR QIRAIAKEHK IPVFLGCQIN RGNQTTADKR PNRHLLRNSG EIFEVCDQLI MLYRDAVYTK DPSDQTIELI VEKNRLYGKL GTATMLCDFS TSRFLNFAR
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