Gene Ava_B0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0328 
Symbol 
ID3677718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp352816 
End bp354165 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content46% 
IMG OID637715033 
ProductDnaB-like helicase 
Protein accessionYP_320227 
Protein GI75812608 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0149353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTTTA ACCACGATAA CGTTATTCCT TTTTCTGCTT CCCAAGATGT GGATCGCCTA 
CCGCCACAGA GCATTGAGGC TGAGGAATCT GTACTCGGCG GCATCATGAT TGACCCACAA
GCATTTGACC GCATCAGCCA TATCCTTGTC CCTGAAGCTT TTTACGTGAG CGCACACACC
ATTATTTACC AAGCATTCAC TCAACTGCGT GCCTCTTTTC AGCCTACAGA TTTACTTTGC
TTGACCAATT GGCTCATGGA TCACAATCTT CTGGAGCGCA TTGGCGGACG AAACAAATTA
GCAACTTTAT TTGACCGCAC TGTTTCTGCC GTCAATATCG ATGTTCTGGC TGATTTAGTC
ATGCAAAAAT ACCGCCGCCG ACAGTTAATC AAAATCGGCA ATGAAATTAT GCAGTTGGGC
TACGAAACCC AAACCGACTT AGGACAAATC TTCTCGCAAG CCGAACAAAA AGTTTTCCGC
GTCACTCAAA ATTCCTCCGA CGAACAATGC AAAGTTCATC AAGCTGCTGA TATGGCTATT
GAACTCTACC AAAAACTGGA GATGGGACAA ATGCAAGGCG ACAAATTTGG CTGGTATGAC
TTGGAAGCTA TCACTGGTGG TCTTTATCCC AGTAGTTTGG TGGTAGTGGC TGCTGAGTCT
CACATGGGCA AAACCCATTT CATGATTTCC ACTGCTTACG AAATCATGAC TAAGCTCGGT
AAGGGTGTTC TCTATGTCAC TCCCGAAATG GATCGCAGTC AAGTCAATGC CCGAATGTTA
GCCAGAATTA CAGGTGTTGA CTCTGCCCAC ATTCAAGCCC AAACACAATC TTACTGGCAG
CAAGTTGCAC AAGGTGTTTG TCAACTGGCT GAAATGCCTT GGCAGATTTT TGAGCATTCT
TCCCCAACTC CCACAATGAT TGCTTCTGCC GTTCGTCGCT CTATTGCTGA AGCGGGTGGT
TCTTTGGGTG CTGTGTTTGT GGACTACTTG CAGCAAATTC CTCTGGAGGG GGGCGGCAAT
ATGGCCCATG AAGTTGGCAA GATTACTCGC CAGATTCGCG CGATCGCTAA AGAACACAAA
ATCCCCGTTT TCTTAGGTTG TCAAATTAAC CGAGGCAACC AAACAACTGC TGACAAACGC
CCTAACCGTC ATTTACTCCG CAATTCTGGG GAAATTTTCG AGGTTTGCGA CCAGTTAATT
ATGCTTTACC GCGATGCTGT GTATACAAAA GACCCTAGTG ACCAAACTAT CGAGTTGATT
GTTGAGAAAA ACCGACTCTA CGGCAAACTC GGCACTGCAA CTATGCTTTG TGATTTTTCT
ACTTCTCGGT TTTTGAACTT TGCAAGGTAA
 
Protein sequence
MHFNHDNVIP FSASQDVDRL PPQSIEAEES VLGGIMIDPQ AFDRISHILV PEAFYVSAHT 
IIYQAFTQLR ASFQPTDLLC LTNWLMDHNL LERIGGRNKL ATLFDRTVSA VNIDVLADLV
MQKYRRRQLI KIGNEIMQLG YETQTDLGQI FSQAEQKVFR VTQNSSDEQC KVHQAADMAI
ELYQKLEMGQ MQGDKFGWYD LEAITGGLYP SSLVVVAAES HMGKTHFMIS TAYEIMTKLG
KGVLYVTPEM DRSQVNARML ARITGVDSAH IQAQTQSYWQ QVAQGVCQLA EMPWQIFEHS
SPTPTMIASA VRRSIAEAGG SLGAVFVDYL QQIPLEGGGN MAHEVGKITR QIRAIAKEHK
IPVFLGCQIN RGNQTTADKR PNRHLLRNSG EIFEVCDQLI MLYRDAVYTK DPSDQTIELI
VEKNRLYGKL GTATMLCDFS TSRFLNFAR