Gene Ava_B0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0307 
Symbol 
ID3677554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp328199 
End bp329818 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content38% 
IMG OID637715012 
ProductType III restriction enzyme, res subunit 
Protein accessionYP_320206 
Protein GI75812587 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0435132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAATTTG ATAACTTGCT ATCAAGAGCA GACGATGGAA CACTACAAGT TTTACTCGGA 
AATGCTGCTG TCCGGTTAAT CAAGCTATTA GATCCTAGTC TTGTAACCCC TAGCCGTCTA
CGAGAAATTT TGATGGAACT ACATACTCCT GCTAGTCTTC TTTTGACAAA GGATAGCCGG
GCCATGCTTT TAGATTTGCT ACGTCCAGAA CAGGCTAAAA TTCTAGCAAC AATTATGCAA
GTTCCGCTTA CAGGAGATAT TTTTGAGACT TTAAAAAAAA CATCAATACG TCATGGTTCT
AACAGAGAGC GTGCCTTATT TGACTTCTTT GAATTGGAAT TGCCACAACC AGAGGATTCA
GTTCAATCGT CTTCATTAGA ACTAGCAGTA TCTAATTATC CCTTATTTGC CCATCAACGT
ATTGCAGCGC GAAAAGTTAA GAATTATTTT AAGCAGGAGC CACGTCGGGT TTTACTGCAT
ATGCCTACAG GATCGGGCAA GACTCGAACC GCTATGAATA TTATTGCAGA TCATTTACGC
TCAGTTGAAC CGACTATAGT TGTTTGGTTA GCGTATAGTG AAGAACTGTG TGAACAAGCC
GCAACCGAAT TTCAGAAAGC GTGGCAATGT TTAGGAGATC GCCAAGTAAG TCTCTATCGT
TTTTGGGGTG AGCATGAAAT AGATGTAGAT AAGTTAGAAG ATGGCATAGT AGTAGCAGGG
CTTTCAAAAG TTTATAATCG TACAAAGCAA AGCATACAAT TTATCAATAG ACTTGGTAAA
GTTTCATCGT TAGTAATTAT CGATGAAGCA CATCAAGCTA TTGCAGAGAC TTATAAGTTA
GTTCTTGATG CACTTGTAGT ACCATATGAA AACACCGCCC TTCTAGGTTT AACTGCTACA
CCTGGTAGAA CTTGGTCTGA TATCAATGTA GATACTGAAT TATCAGAATT TTTTGCAAAA
AACAAAGTAA CTCTTGAAGT TTCGGGGTAT AGCAATCCCG TCGATTACCT AATATCAGAG
GAATATTTAG CAAAGCCTAA TTTCCGCTCT TTATTTTATA AAAACGGCTT GAAGTTAACA
CAGAAAGATT TGGAGCGAAT ACAACAAGAA TTAGAAATAC CTCAACATAT TTTAGAACAG
TTAGCTGATG ATGAACAAAG AAATCTCAGC ATCATTATAG AAGTAGAAGA ATTAGCCAAA
CGTCATCAAA GAATTTTGAT TTTTGGAATT TCAATAAAAC ATTCAAAATT ACTTGCCACT
GTACTCCGAG CTAGGGGTTT ACAGGCAAAT GTAGTTACTG GTGATACTCC ATTATTGGAG
CGAACGCGCT TAATTAATAG TTTCAAAGAT GATTCTGATG AAACCAAAAT TATATGTAAT
TACGGTGTTT TAACTACGGG TTTTGATGCC CCTCGAACAA GTGCAGCAGT CATTGCGCGT
CCCACAAAAT CTCTTGTACT CTACAGCCAA ATGGTTGGAC GGGCTATTCG AGGTGTAAAA
GCAGGTGGTA ATGTAACTGC TGAGATTGTT ACCGTTGTTG ACAGCGCTTT ACGGGGATTT
GGTTCTCTTG AAGAAGCTTT TAGTAATTGG GAAGATGTTT GGCATAAAGA AAAAATTTAG
 
Protein sequence
MQFDNLLSRA DDGTLQVLLG NAAVRLIKLL DPSLVTPSRL REILMELHTP ASLLLTKDSR 
AMLLDLLRPE QAKILATIMQ VPLTGDIFET LKKTSIRHGS NRERALFDFF ELELPQPEDS
VQSSSLELAV SNYPLFAHQR IAARKVKNYF KQEPRRVLLH MPTGSGKTRT AMNIIADHLR
SVEPTIVVWL AYSEELCEQA ATEFQKAWQC LGDRQVSLYR FWGEHEIDVD KLEDGIVVAG
LSKVYNRTKQ SIQFINRLGK VSSLVIIDEA HQAIAETYKL VLDALVVPYE NTALLGLTAT
PGRTWSDINV DTELSEFFAK NKVTLEVSGY SNPVDYLISE EYLAKPNFRS LFYKNGLKLT
QKDLERIQQE LEIPQHILEQ LADDEQRNLS IIIEVEELAK RHQRILIFGI SIKHSKLLAT
VLRARGLQAN VVTGDTPLLE RTRLINSFKD DSDETKIICN YGVLTTGFDA PRTSAAVIAR
PTKSLVLYSQ MVGRAIRGVK AGGNVTAEIV TVVDSALRGF GSLEEAFSNW EDVWHKEKI