Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0285 |
Symbol | |
ID | 3677571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 306821 |
End bp | 308206 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637714991 |
Product | IS891/IS1136/IS1341 transposase |
Protein accession | YP_320185 |
Protein GI | 75812566 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.310253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACGGA CACTTTGCTC AAGTCGGCAA AGCCGCCCAC GCCAGTGTCC TCATGAATGG CGTTTGCTTG TTGACGACAA TCTTCCGACC GATGCCGATA GGCAAGGGAG GAAGATATGG AGGAAACTAG CAATTTCTAT GTCATACTTT TTTATAGCAA ACGTTGTTTA CTCTAATATG TTAAGAGTCG TCAAAGTCAG GTTATATCCA GACACCCAAC AGCAGCAGTC ACTAGCACAA GCTTTTGGTA GTTGTCGTTG GTTATGGAAT TATTGCCTGA ACTTGATGAA CCAGACATAC AAGGAGACTG GTAAGGGGTT ATCTGGATAC GAAGTTAAAA AGATAATTCC CCAGTTAAAA AAAGAATATG AGTGGTTATC GCTAACTTAC TCACAATGCT TGCAACAAGT TTGCTTGAAT CTTGGAGTAG CTTTTAATAA TTTTTTTGAG AAACGGGCTA AATATCCTAG ATTCAAATCA AAACATGGTA AACAGTCAAT ACAATATCCT CAAAATGTCA AAATTAATGA TAATTCTGTG AGTCTCCCAA AAATAGGAGA TGTCACAGCG ATGATTCATA GACCTATTGA GGGAAAAGTT AAGACTGTAG CCCTATCTAA AAACTGTTCT AATCAATACT TTGCGGCTAT TCTTTTTGAT GATGGTAAAG ACAAACCAGA ATCAAATACA GAAGGTAAAG CGATAGGTAT TGACTTGGGA TTAACTCACT TTGCAGTTAC TAGCGATGGT TCTAAGTTTG ATAATCCTAG AATACTCAGC AAACATGAGA AGAATTTAAA ACTTAAACAG CAGCAGTTAT CTAGAAAGCA GAAGGGTTCT AATAACCGTA TTAAAGCCAG AAATAAAGTT GCTAGAGTTC ATAGGAAAAT AACTAACTGC CGTGAGGATT TTCTACAAAA GCTATCTCGT AGAATAGTCA ACGAAAACCA AGTTATAGTG CTTGAAAATC TAAATGTTAA AGGCATGATG CAGAATCATA AACTAGCCAA GTCTATACAT CAAGTTGGAT GGGGAATGTT CTGTACCATG TTGAAATACA AGGCAGAAAT GGAAGGGAAG ATTTATCTTG AAGTTGATAG ATTTTTTCCC AGTTCAAAAA CTTGTCATGT GTGCCTTAAT CAAGTTGGTG GTTTGCCACT TGATGTAAGA TTTTGGACTT GCGATAATTG CCAAACTAGG CACGACAGGG ATGTGAACGC AAGCATTAAC CTCAGAGATG AGGGTCTACG AATTTTGACC TCTGGAACGG GGGATAAAGC CTGTCGCCCA GATGTAAGTC GTAGTAAGGG AGGACGCAAG AAATCCACTA CTGTGCTTTC TGTTGGACAG GAAGCCTACA CTGTACCGTC AGGTCAGTGT AGGTAG
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Protein sequence | MRRTLCSSRQ SRPRQCPHEW RLLVDDNLPT DADRQGRKIW RKLAISMSYF FIANVVYSNM LRVVKVRLYP DTQQQQSLAQ AFGSCRWLWN YCLNLMNQTY KETGKGLSGY EVKKIIPQLK KEYEWLSLTY SQCLQQVCLN LGVAFNNFFE KRAKYPRFKS KHGKQSIQYP QNVKINDNSV SLPKIGDVTA MIHRPIEGKV KTVALSKNCS NQYFAAILFD DGKDKPESNT EGKAIGIDLG LTHFAVTSDG SKFDNPRILS KHEKNLKLKQ QQLSRKQKGS NNRIKARNKV ARVHRKITNC REDFLQKLSR RIVNENQVIV LENLNVKGMM QNHKLAKSIH QVGWGMFCTM LKYKAEMEGK IYLEVDRFFP SSKTCHVCLN QVGGLPLDVR FWTCDNCQTR HDRDVNASIN LRDEGLRILT SGTGDKACRP DVSRSKGGRK KSTTVLSVGQ EAYTVPSGQC R
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