Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0243 |
Symbol | |
ID | 3677610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | + |
Start bp | 274535 |
End bp | 276784 |
Gene Length | 2250 bp |
Protein Length | 749 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637714949 |
Product | helicase RecD/TraA |
Protein accession | YP_320143 |
Protein GI | 75812524 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0357399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACTC TACCAACAGC ACAACAAACC GAAGCACAAC CCCACTACGA AATCATCACC GGAGTAGTCG AGCGCCTAAC GTTCCACTCA GAGGAATCCG GGTATACAGT CGCACGTCTA ACCCGCTCCC GCAGTACCGA CCTCACCACC ATCGTCGGCA GCTTCGCTAA CATCCAGCCT GGGCAAACGC TACAGCTAAC AGGCTTCTGG AAAGACCATC CGCAGTACGG GCCACAATTC AATGTCACTA ACTACCACGA AACCAAACCC GCTACCCTCA CCGGAATCGA GAAATACCTG GGTAGCGGAC TAATCAAAGG AGTCGGGCCG GTCACAGCAA GGCGCATTGT TGCACATTTC GGGTTAGAAA CACTCGACAT CATTGAGAAC CAAATTGACC GCCTAATTGA AGTACAAGGT ATCGCCAAGA AACGCATCAA GCTCATCAAG AACGCCTGGG AAACGCAAAA GGCAATCAAA GAGGTGATGG TGTTCTTGCA AACCCACGGC GTTTCTACAA CATACGCCGT AAAAATATAT AAACAATACC AAGATAAAGC GATCGCCACC GTCACTGCGA ACCCGTACCA GCTTGCGACC GACATCTACG GTATTGGCTT CTTGACCGCC GACAAGATTG CGCGAAATCT TGGTGTACCC TCAAGCTCAG AATTTCGTTA CAGCGCTGGC ATTATCCACG CATTGAGTGA AGCAGCCGAA GATGGTCATT GTTATCTCCC CCAGCCGGAA CTCATCGAGA AAGTTATCAA GCTACTAACA ACCGATGACC ATCAGCCAAC AAATGAAGCG ATCGCGGACA TCATCAAAGA TATGTCAGCC AAGGAAGAAC TCATCCGGGA ATATGTTAGA GACAGCTACG GAGAAAAGTT ATTGCTGTGC TATAAGCCGA GCTTCTTCCA CACCGAGCAG AATTTAGCAC AGTTGATATC TCGACGGTTA CGCCAACAAG TTAAACAAGA TATTCCCCGC GTCCGTGCTT GGCTAGAGCG ATTCATGTCC AGCCGCAAAA TTCAGCTATC ACCCCAACAG CAGCAAGCGG TAGAGAAGGC AGCTTACTCT CCGGTAATGG TTCTTACTGG TGGGCCAGGG GTGGGGAAAA CCTTCACGAC ACACACCATA GTTTCATTGT GGAAAGCGAT GGGAAAAAAC ATTGCCCTAG CTGCACCAAC AGGAAGGGCC GCACAGCGAT TATCCGAGAT GACTGGGCTG GAAGCTAAGA CCATTCACCG CTTGCTGGAA TTTGACCCGA AAACAATGGG TTTCAAACGG GATAACGAAA ATCCCCTGCC CTTCAGTGCC ATTATTGCCG ATGAGGCTTC GATGTTAGAC CTATTTCTGG CACATTCGCT CTTTAAAGCG GTAGCTAATG GAGCGCAACT ATTATTAGTG GGTGATATTG ACCAATTACC ATCAGTAGGC CCTGGTAAAG TGCTGGCAGA CCTAATCACT TCACTACAAG TACCAGTGGT GAAGCTAACG CAAGTATTTC GCCAAGCCCA GCAAAGCGCA ATTGTGACGG CAGCGCACCA AATCAACCAG GGGGATTACC CAAAGATTGA ACCAATCAGC GATAATCCGC AGTCGGACTG CTTGTGGCAT GGTGGTGGCC ACAGCCCTGA ACACGGAGTC CAAGCAATCT GTGAATTGGT AGGCGAGTTT ATCCCACGGC TGGGTTTTAA TCCAGGCACG GATGTACAGG TGTTGTCTCC AATGTCGCGG GGGTTAGTCG GGACTAGAAA TTTGAATGCC GTTTTGCAGC AGCTGATCAA TCCGCCTGCA TCGGGGAAAG TCGAGATTAG CCGGGGTGGG ATGATTCTGC GCGAGGGCGA TCGCGTTATA CAACAGATGA ATGATTATGA CCGCGAGGTC TTTAACGGGG ATTTGGGGAC TATTTTAAAT ATTGATACGG AGGAGCAAGA GGTTACGGTT GAGTATGGTG GTCGGGCTGT GGTGTATGAT TATGCGGATC TCAATGAGAT AACTTTGGCA TTTGCGATTT CATGTCATAA AAGCCAGGGC GGAGAGTTTC CAGTTGTAAT ATTTCCACTT TTCATGCAAC ATTATGTCAT GCTTTCGCGG AATTTGTTTT ATACAGGTCT GACCAGGGCA AGGAAGTTAG CGATTGTGGT TGGTTCCAAG AAGGCGATCA CCTTGGCAGT CAGAACTACG AATGATCAGC AGCGCTACAC TCGGTTGTGG CAGAGGTTGT TGCAGCCGAT GGCTTTGTAG
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Protein sequence | MSTLPTAQQT EAQPHYEIIT GVVERLTFHS EESGYTVARL TRSRSTDLTT IVGSFANIQP GQTLQLTGFW KDHPQYGPQF NVTNYHETKP ATLTGIEKYL GSGLIKGVGP VTARRIVAHF GLETLDIIEN QIDRLIEVQG IAKKRIKLIK NAWETQKAIK EVMVFLQTHG VSTTYAVKIY KQYQDKAIAT VTANPYQLAT DIYGIGFLTA DKIARNLGVP SSSEFRYSAG IIHALSEAAE DGHCYLPQPE LIEKVIKLLT TDDHQPTNEA IADIIKDMSA KEELIREYVR DSYGEKLLLC YKPSFFHTEQ NLAQLISRRL RQQVKQDIPR VRAWLERFMS SRKIQLSPQQ QQAVEKAAYS PVMVLTGGPG VGKTFTTHTI VSLWKAMGKN IALAAPTGRA AQRLSEMTGL EAKTIHRLLE FDPKTMGFKR DNENPLPFSA IIADEASMLD LFLAHSLFKA VANGAQLLLV GDIDQLPSVG PGKVLADLIT SLQVPVVKLT QVFRQAQQSA IVTAAHQINQ GDYPKIEPIS DNPQSDCLWH GGGHSPEHGV QAICELVGEF IPRLGFNPGT DVQVLSPMSR GLVGTRNLNA VLQQLINPPA SGKVEISRGG MILREGDRVI QQMNDYDREV FNGDLGTILN IDTEEQEVTV EYGGRAVVYD YADLNEITLA FAISCHKSQG GEFPVVIFPL FMQHYVMLSR NLFYTGLTRA RKLAIVVGSK KAITLAVRTT NDQQRYTRLW QRLLQPMAL
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