Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0237 |
Symbol | |
ID | 3677705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 264362 |
End bp | 266509 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637714943 |
Product | bacteriocin-processing peptidase |
Protein accession | YP_320137 |
Protein GI | 75812518 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.821835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAT ACCCCGTCGT CCTACAACAC AACGAAGAAG ACTGTGGCCC CGCCTGTCTA GCCACCATCT GCAAATACTA CGGACGGCTA TTCACCATCA ACCGCACCCG TGAAGCCGCA GGAACAGGAC AATTAGGAAC AACTTTACTC AACCTCAAAC AAGGGGCGCA AGTTTTAGGC TTCAATGCGC GGGGAGTGAA AGCTGTTATC GACTTAGTAG ATAAGCAACA GATACCTCTC CCAGCCATCA TTCACTGGAA AGGTAATCAC TGGACTGTAT TATATGGACG CAGAGGTAAA CAATATATCG TCGCTGATCC CTTGGTGGGT GTGCGTTATT TAACCAAAGA AGCACTGTTA ACTGGTTGGA CTAACGGCGT AATGCTGCTA CTAGAACCCC GTCCCGATTT CCTTTCTCAA GCAGATGATC AAGATAAAGT CGGCGGGTGG AAACGCTTAG GGCAACGTCT ATTTAGTTAC CGTCATATCT TAGCAGAAGC CTTACTACTT AACTTTGTCG TCGGCTTATT AGCCTTACTT TCGCCATTTC TCATCCAAAT TCTCACAGAT GATGTTTTGG TGAGGGGAGA CACCCAATTA CTCACGGGTA TAGCCTTGGG AGTCTTAGCG ATGAGTTTAA TTAGTAGTGC TTTGCAATGG GTACAAGGAA ACTTAGTAGC ACACTTTGCC CATCGTTTAG AATTAGATTT AGTCTTAGAA TTTGGCAGAA TCATTTTACG TTTGCCTTTG TCCTATTATG AATCTCGCCG TAGTGGTGAA GTGGTGAGTC GGTTACGGGA TATTCAAACC ATTAATCAAT TAGTTTCGCA AGTGGGTGTG ACTTTACCCA GTCAATTATT AATTGCGATC GCTTCTTTAG CTTTGATGCT ATTTTATAGC CCTAAACTCA CCCTCGCCTC ATTATTCATC GCTTTATTCA TGCCCCTATC CACAGTGGTT TTCTTCCCCA GTCTGCAACA GAAAATCCGC AATGTTCTAG GAATAGCTGC CGAAAATCAA GGTATTTTAG TGGAAACCTT CAAAGGTGCA TTAGTTGTCA AAACTACCAA TGCAGCCCCG GAATTTTGGC AAGAATTTCA AACTCGCTAC GGTAGACAAG CTAACTTCAT GTTTCGTACC GTGCAGATTG TCATTACTAA TAATATTTTT TCTGGTTGGG TAGCCACATC GGGAGGGATA ATTTTGCTGT GGTTCGGCAG TACATTGGTA ATTAATCGAG AAATCACAAT AGGGCAACTA TTAGCTTTTA ATAGTTTAAA TACTCAGATT ATTGCCTTAG TCAATACAGT CGTTGGTTTT GTCACCGAAT TTACCCGCGC CCAAGCCGCT ACAGAACGTT TAAATGAAGT TATTCAATCT ACCCCAGAAT TTCCTGAAGT CAATCACAAA CCCTTTGTCA ACATTCCCGA CAATGCAGAG ATTATTTGCA GTTATCTCAA TTTTCACCAT CCTGGGAGAG TAGATTTATT ACAAGATTTC TCCTTGACTC TCCCAGGGGG AAAAGTGATA GCCATTATTG GACAATCAGG GTGTGGTAAA AGTACCCTCA CTAAACTCCT AGCTGGGTTG TACACTCCCC AATCAGGGAA TATTCGCATC CACCGCTACA ACCTCCAAGA TTTATCACCC GATTGCTTGC GTCAACAAGT AATTTTAGTT CCTCAAGAAG CTCATTTTTG GAGTCGTTCA ATTTTAGATA ATTTGCGTCT TGGTAATCCC CAAGTTAACT TTGAACAAGT CGTGACAGCT TGTCAGGTAG CAGGTGCAGA CACATTTATC AGTAAATTGC CGGAGAAATA TCAAACTATC TTAGGTGAAT TTGGGGCTAA TCTTTCCGGC GGACAAAGAC AAAGATTAGC CATAGCCAGA GGGATAGTCA CCCATCCACC AATTTTGATT TTAGATGAAT CCACTGCTGG ACTAGATCCC AAAACCGAAA GTGTAATTTT AGACCAGTTA CTAGCCTATC GCCAAGGGAA AACCACAATC CTGATTAGTC ATCGTCCCCA CGTCATTAAA CGTGCCGACT GGATTGTACT CTTAGAAGCC GGACAACTCC AACTCCAAGG CACTCTCTCC GAACTACTCA ACATCCCTGG TGAACACCTA GATTACCTCA TCTCTTGA
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Protein sequence | MIKYPVVLQH NEEDCGPACL ATICKYYGRL FTINRTREAA GTGQLGTTLL NLKQGAQVLG FNARGVKAVI DLVDKQQIPL PAIIHWKGNH WTVLYGRRGK QYIVADPLVG VRYLTKEALL TGWTNGVMLL LEPRPDFLSQ ADDQDKVGGW KRLGQRLFSY RHILAEALLL NFVVGLLALL SPFLIQILTD DVLVRGDTQL LTGIALGVLA MSLISSALQW VQGNLVAHFA HRLELDLVLE FGRIILRLPL SYYESRRSGE VVSRLRDIQT INQLVSQVGV TLPSQLLIAI ASLALMLFYS PKLTLASLFI ALFMPLSTVV FFPSLQQKIR NVLGIAAENQ GILVETFKGA LVVKTTNAAP EFWQEFQTRY GRQANFMFRT VQIVITNNIF SGWVATSGGI ILLWFGSTLV INREITIGQL LAFNSLNTQI IALVNTVVGF VTEFTRAQAA TERLNEVIQS TPEFPEVNHK PFVNIPDNAE IICSYLNFHH PGRVDLLQDF SLTLPGGKVI AIIGQSGCGK STLTKLLAGL YTPQSGNIRI HRYNLQDLSP DCLRQQVILV PQEAHFWSRS ILDNLRLGNP QVNFEQVVTA CQVAGADTFI SKLPEKYQTI LGEFGANLSG GQRQRLAIAR GIVTHPPILI LDESTAGLDP KTESVILDQL LAYRQGKTTI LISHRPHVIK RADWIVLLEA GQLQLQGTLS ELLNIPGEHL DYLIS
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