Gene Ava_B0226 details

Gene Information

• Locus tag: Ava_B0226
• Symbol: thrS
• ID: 3677694
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_007410
• Strand: +
• Start bp: 254252
• End bp: 256096
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637714933
• Product: threonyl-tRNA synthetase
• Protein accession: YP_320127
• Protein GI: 75812508
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCAAGT CCCTAACCCA GTCACAGGAA AACTTAAGCC AGCATGACAG TGATAAACTT 
CTGCGAATTC GTCATACCTG CGCCCACATA ATGGCAATGG CTGTAAAAAA AGTATTTCCA 
GGGACTAAAG TAGCAACTGG CCCAGTCACA GAAAATGGTT TTTACTACGA CTTCGATTGT 
CCAGTCAGCA TCACTCCCGA TGACTTGAGT AAAATCGAAG ACCAAATGCG GCGGATAATC 
AAAGCTAACC TCCCTATCAT TCGCGAAGAG GTACAACGAG AAGAAATTCG CACCGAAATT 
GCCCAATTAA ATGAATCTTA CAAGTTAGAA ATATTAGACC GTATTCCAGA AGGGGAGACA 
ATTACCCGTT ACTTTATTGG TAGTCCCGAT ACTGGTAAAC CAGAATCTTC ATTGTTTATC 
ACAGACATTC AACCAGCAAG TAACTATTGG TGGGACTTAT GTGCAGGGCC ACACATTAAC 
TTTACTGGTG AAATTGAGCC TGATGCCTTT AAATTGTTAA ATATTGCTGG TGCGTATTGG 
CAAGGAGATG AAACCAAAGC TCAACTGCAA CGCATTTATG GTATAGCTTG GGAAACCAAA 
GAACAACTAC AAGCTTACCT CAAACAAAGA GAAGAAGCCC TACGCCGCGA CCACAGAAAG 
TTAGGTCAAG AACTCAACTT ATTCAGCATT CAAGAAGATG CTGGTGGTGG TTTAGTATTT 
TGGCATCCTA AAGGCGCAAT TATTCGTTAC ATCATCGAAG ATTATTGGCG CAAATCTCAT 
CTAGAATCTG GTTATCAATT ACTCTACACA CCGCATATAG CCAACCTCGA TTTATGGAAA 
ACATCGGGTC ATTTTGACTT CTATCAAGAG AATATGTTTG ATTCGATGGA TGTGGAAAAT 
CAGGCTTATC AAATTAAGCC AATGAATTGT CCATTTCATG TCTTAACTTA TAAGCATCAA 
CTCCATTCTT ATCGAGAATT ACCTTTAAGA TGGGCAGAAT TAGGAACAGT TTATCGCTAT 
GAACGTTCTG GAGCATTACA TGGTTTGATG AGAGTCAGGG GATTTACCCA AGATGATGCT 
CATGTCTTCT GTTTACCTAA TCAAATTGCT GATGAAATTT TAGGAGTTTT AAATCTCACA 
GAGCAGATTT TGTCAGATTT TGGCTTTAAA AATTATGAAG TGAATCTTTC TACCCGTCCT 
GAAAAATCAG TGGGGAATGA TGAAGTATGG GAATTAGCAA CTTCAGCATT AAGACAAGCT 
TTGAATACTA AAGGCTGGAA TTATATTGTC GATGAAGGTG GGGGTGCTTT TTATGGCCCT 
AAAATTGACA TCAAAATCCA AGATGCGATA GGTCGTCTCT GGCAATGTTC AACTATTCAG 
GTAGATTTTA ATTTACCTGA ACGTTTTGAT ATGGAATATA TTGCAGTCGA TGGTAGCCGC 
CAACGACCAA TTATGATTCA TCGAGCTATT TTTGGCTCAT TGGAACGCTT TTTCGGGATT 
TTAATAGAAA ATTATTCTGG TGATTTTCCT TTGTGGTTAG CACCAGTGCA ACTGCGATTA 
TTACCTGTGA GTGATGAAGT GAGAGAATAC GCTCAATTAG TGGTAATTTC ATTGAAAAAA 
GCTGGAATTA GGGTAGAAAC AGACAGCAGT GGTGAGCGTT TAGGTAAGCA AATTCGTACA 
GCAGAGTTAG AAAAAATTCC TGTTGTTGCT GTTGTGGGTA AAAAAGAAGT AGAGAATCAA 
AACTTGAGTG TAAGAACTAG ACAATCTGGA GATTTGGGCG TACTAAATAT GGATGAAATT 
CTACATCGTT TACAAGATGC TATAAATTCC AAATCAGTAC TTTAA 

 

Protein sequence

MVKSLTQSQE NLSQHDSDKL LRIRHTCAHI MAMAVKKVFP GTKVATGPVT ENGFYYDFDC 
PVSITPDDLS KIEDQMRRII KANLPIIREE VQREEIRTEI AQLNESYKLE ILDRIPEGET 
ITRYFIGSPD TGKPESSLFI TDIQPASNYW WDLCAGPHIN FTGEIEPDAF KLLNIAGAYW 
QGDETKAQLQ RIYGIAWETK EQLQAYLKQR EEALRRDHRK LGQELNLFSI QEDAGGGLVF 
WHPKGAIIRY IIEDYWRKSH LESGYQLLYT PHIANLDLWK TSGHFDFYQE NMFDSMDVEN 
QAYQIKPMNC PFHVLTYKHQ LHSYRELPLR WAELGTVYRY ERSGALHGLM RVRGFTQDDA 
HVFCLPNQIA DEILGVLNLT EQILSDFGFK NYEVNLSTRP EKSVGNDEVW ELATSALRQA 
LNTKGWNYIV DEGGGAFYGP KIDIKIQDAI GRLWQCSTIQ VDFNLPERFD MEYIAVDGSR 
QRPIMIHRAI FGSLERFFGI LIENYSGDFP LWLAPVQLRL LPVSDEVREY AQLVVISLKK 
AGIRVETDSS GERLGKQIRT AELEKIPVVA VVGKKEVENQ NLSVRTRQSG DLGVLNMDEI 
LHRLQDAINS KSVL