Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0223 |
Symbol | |
ID | 3677691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 250795 |
End bp | 251559 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637714930 |
Product | ABC transporter-like |
Protein accession | YP_320124 |
Protein GI | 75812505 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCAAGACA TTGTACTCGC AGTTGAGCAA CTCACGGTTT ATCGAGAAAC CTACGCGGCG GTGCAGGATG TTTCCTTTTC CCTAGAGGCA GGCACCGATA CGGCGATCGT TGGGCCGAAT GGGGCAGGCA AAAGTACGCT GGTGCAAGCC ATTCTGGGCA TTCTACCACG TCTTGCAGGG AACGTTTTCA TTCTGGGGCA ACCGTTGAGC CGCAAAGGAT CACTCGCGCC CCAGATCCGT CAACAGATTG CCTACCTGCC GCAAAACTTC CTATTTGATC GCCGCATCCC GATGACGGTA GAAGAACTGG TCGGTTTGGG CTGGGACAGG CTAGGATTTC AACTGCCCTG GGCAAACAGT AGAAAACGTC GTCATGCCGT TCGAGATGCT TTAGCCAAGG TAGATGCACT CCATCTTAGA CAGCAAATGA TTAGTGGGCT TTCTGGGGGT GAAACGAAGC GGGTGTTGCT GGCATATTGC CTAGTTTACC CACGTCGATT GTTGATTCTA GATGAAGCTC CGGCAGGATT GGATATGCGC GGTGAAACAG AGTTTTATCA ATTGCTCTAT CAACTTAAGC TAGAGCAAGG CTGGACAATT TTGCAAATCT CCCACGATTT AAATATGGTG CGGCGGCATT GCGATCGCGT TCTGTGTCTC AATCGCACTT TACTTTGTCA GGGAACCCCA GAAGTTGCCC TTTCTCCCGA CAATCTTTCT GCTGCCTATG GCTCTGAATT CGTTCGCTAT CACCATCACT GTTAG
|
Protein sequence | MQDIVLAVEQ LTVYRETYAA VQDVSFSLEA GTDTAIVGPN GAGKSTLVQA ILGILPRLAG NVFILGQPLS RKGSLAPQIR QQIAYLPQNF LFDRRIPMTV EELVGLGWDR LGFQLPWANS RKRRHAVRDA LAKVDALHLR QQMISGLSGG ETKRVLLAYC LVYPRRLLIL DEAPAGLDMR GETEFYQLLY QLKLEQGWTI LQISHDLNMV RRHCDRVLCL NRTLLCQGTP EVALSPDNLS AAYGSEFVRY HHHC
|
| |