Gene Ava_B0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0217 
Symbol 
ID3677763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp242606 
End bp245158 
Gene Length2553 bp 
Protein Length850 aa 
Translation table11 
GC content43% 
IMG OID637714924 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_320118 
Protein GI75812499 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4774] Outer membrane receptor for monomeric catechols 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCAAC TAAGACAGTT CTTTTGTGTG GGAATTGCAG GAACTATATA TCTGATAGGA 
ATTGGGACTG CAAAGGCACA GAACGACGAG AATATAAGTA AAATACCTAT CACAAACATT
TCCCAAATCT CGGATATCAA ACGTCCACAT ACCAATGTCA AAGAATGGCT AGCGCAGCAG
CAGGCTCAAA TTATCCAAGT GACAGGGGTA AGCCTAAACC AAACTTCTAA TGGTTTAGAA
GTCATTCTAG AAACTACTGC TTCTGACAAA CTGCAAACTT CACTCAACAG TGAAGGTAAT
ATCCTGAGTG TTGATATCCC CAATGCTCAA TTACGTCTAG CTAGTGGTGA TTCTTTCCTT
TCCCAAAAGC CAGTTGCGGG AATTACAGAA ATAACGGTAA TAAATCAGGA TAGCAATACT
ATTCGAGTTA CAGTAATCGG TGAGACGAGT TTACCGAAAG TTGAGCTAGA TGACAGCGAG
AACGGTCTAA TTTTTGTTGT CACACCAATT ACAACTTCTG CACAGCAACC ACAAACACCA
CAGACAAATC AGGCTGATAG TGAAACACCA GCAACCCAAC CATCAGCTCA AAATGATGAA
CCTATCGAAC TAGTTGTAAC AGGGACAAGA TTTGAAATTC CCATCCAAGA CACTCCGCAA
TCAATTCAGG TGATTCCACG TCAAGTGCTG GAAGATAGAG GAGCAGTGCG TTTGGATGAG
TTTACCGATA ACGTCAGTGG TGTCCAACGG ATAACAGGTG GAGACGGACT TGGGTCATCA
GGCTTTATCA TTCGTGGGTT CTCTGATGTA TATGAAAATC TCCGCAATGG ATTTCGCTCT
CAGGGCGGTT TTCCACGCGA TCTGGCCAAT ATTGATCGGG TTGAGGTACT TAAAGGCCCG
GCGGCGGCTT TGTATGGTGG TGGTTTTCAG TCAGGTATTG TGAATATTTT GACGAAAAAA
CCCCTTGACG AACCACGTTA TGAAGTCAAA GCTACTGTTG GGAGTTACGA CTTTTATCGT
GGTGAACTCG ATTTAACAGG CCCATTAGTA GAAAATCGAT CGCTGCTGTA TCGTCTGAAC
GTCGCTTATC AAAATCAGGG GAGTTTTCGT GACTTCCTTA ACTACAAAAG CTTTTTTGTC
GCGCCATCTT TGACCTGGAA TATCAGCCAA CGTACTAGTC TGAGCTTTGA TTATGAATAT
TTCAACACTG ATTACCCCGA TGATGAAACA TTTAGAGCCG AGCCAGAATT TTTGCGAATC
TCCCCTAAAA CCTATTTAGG TGAACCAGAT TTAGCCAATG AAAATTTCAC TGCTCATTCA
CTCTCACTCG AATTTTCACA TGAGTTTAGT GATAACTGGC AGTATCGATT AGGATTTAAT
ACACTTTGGC AAGATGTTTT TGACGAGGGA GCAACTCGTA GTGGTAGACT GCAAGCAGAT
CGTCGCACAT TGAATCGGCA GTTCACTAGA CGCACTAACG ATCTGGAAAA TCTGACCCTG
AGAAACGAAA TTTTAGGAAA GTTCAATACT GGTTCTGTGC GGCATAATCT ACTCTTTGGG
GTGGATTACT CCCGCTTGGA GTATGCCTAT ACCTTCTCTA GTGCGCCGAT CGCTCCCATC
GATATCTTTA ATCCAATCTA CGGTGCTAGA CCAACAGCAG CGCTTTCACT GAACTCTAAC
GAGGCATACG GTGATGATAC CCTTGGTATT TACCTTCAGG ATATTGTTGA AGTGCTGCCT
AGTTTGAAAA TTCTAGCAGG AGTGCGCTTT GATAATGTCA ATGGCTTCTA CGAAAACCGC
GAAACAAACA CTAGCATTAA TGAAGTAAGT GATAGTAAGT TTTCACCGAG ACTTGGTATT
GTTTATCAGC CAGGCAATAC GACAACACTT TATGCTAGCT GGTCAAACTC ATTCACACCC
CAAATCTTTG GTAGAAACTC CAATGGGGAA CAATTTAAAC CTGTGACTTC CGAGCAATAC
GAGGTAGGAA TTCGCCAAGA GTTTTTAGAC CAGCGACTGT CAGCAAATCT GGCGCTATTC
CAAATTACAC GCCAGAACGT CGCTACCACA GACCCAAACT CCTCTGACCC TTTTGCCAGA
ATTCAGACGG GAGAGCAACG TAGTCGTGGG GTTGAATTGG ATATTAATGG GGAAATTTTA
CCTGGCTGGA AAATGATTCT GACTTATGCT TATACCGATG CACAGGTGAC AGAGGATAAT
CGCATCCCTG TAGGCGATCG CTTACCGAAT GTCCCTTACA ATAGCGCTAG TCTATGGACA
ACTTATGAAA TTCAAAGTGG CAATCTGCAA GGATTGGGTG CAGGCTTGGG GATCGTGTAT
GTAGGCGATC GCCAGGGTGG ACTGCCTAAT ACAATCACCA TACCTTCATA CGTCCGTACA
GATGCAGCAT TATTCTATCG CCGCCGTCAG TTTGAGGCAC GCCTAAACTT CAAAAATCTC
TTTGATACTA ATTATTATGA TGCCACTGAT GGCACATCAA TTAATCCCCA AGAGCCATTT
ACGCTCATTG GTAGTTTTTC CTACAGATTT TGA
 
Protein sequence
MLQLRQFFCV GIAGTIYLIG IGTAKAQNDE NISKIPITNI SQISDIKRPH TNVKEWLAQQ 
QAQIIQVTGV SLNQTSNGLE VILETTASDK LQTSLNSEGN ILSVDIPNAQ LRLASGDSFL
SQKPVAGITE ITVINQDSNT IRVTVIGETS LPKVELDDSE NGLIFVVTPI TTSAQQPQTP
QTNQADSETP ATQPSAQNDE PIELVVTGTR FEIPIQDTPQ SIQVIPRQVL EDRGAVRLDE
FTDNVSGVQR ITGGDGLGSS GFIIRGFSDV YENLRNGFRS QGGFPRDLAN IDRVEVLKGP
AAALYGGGFQ SGIVNILTKK PLDEPRYEVK ATVGSYDFYR GELDLTGPLV ENRSLLYRLN
VAYQNQGSFR DFLNYKSFFV APSLTWNISQ RTSLSFDYEY FNTDYPDDET FRAEPEFLRI
SPKTYLGEPD LANENFTAHS LSLEFSHEFS DNWQYRLGFN TLWQDVFDEG ATRSGRLQAD
RRTLNRQFTR RTNDLENLTL RNEILGKFNT GSVRHNLLFG VDYSRLEYAY TFSSAPIAPI
DIFNPIYGAR PTAALSLNSN EAYGDDTLGI YLQDIVEVLP SLKILAGVRF DNVNGFYENR
ETNTSINEVS DSKFSPRLGI VYQPGNTTTL YASWSNSFTP QIFGRNSNGE QFKPVTSEQY
EVGIRQEFLD QRLSANLALF QITRQNVATT DPNSSDPFAR IQTGEQRSRG VELDINGEIL
PGWKMILTYA YTDAQVTEDN RIPVGDRLPN VPYNSASLWT TYEIQSGNLQ GLGAGLGIVY
VGDRQGGLPN TITIPSYVRT DAALFYRRRQ FEARLNFKNL FDTNYYDATD GTSINPQEPF
TLIGSFSYRF