Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0217 |
Symbol | |
ID | 3677763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 242606 |
End bp | 245158 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637714924 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_320118 |
Protein GI | 75812499 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCAAC TAAGACAGTT CTTTTGTGTG GGAATTGCAG GAACTATATA TCTGATAGGA ATTGGGACTG CAAAGGCACA GAACGACGAG AATATAAGTA AAATACCTAT CACAAACATT TCCCAAATCT CGGATATCAA ACGTCCACAT ACCAATGTCA AAGAATGGCT AGCGCAGCAG CAGGCTCAAA TTATCCAAGT GACAGGGGTA AGCCTAAACC AAACTTCTAA TGGTTTAGAA GTCATTCTAG AAACTACTGC TTCTGACAAA CTGCAAACTT CACTCAACAG TGAAGGTAAT ATCCTGAGTG TTGATATCCC CAATGCTCAA TTACGTCTAG CTAGTGGTGA TTCTTTCCTT TCCCAAAAGC CAGTTGCGGG AATTACAGAA ATAACGGTAA TAAATCAGGA TAGCAATACT ATTCGAGTTA CAGTAATCGG TGAGACGAGT TTACCGAAAG TTGAGCTAGA TGACAGCGAG AACGGTCTAA TTTTTGTTGT CACACCAATT ACAACTTCTG CACAGCAACC ACAAACACCA CAGACAAATC AGGCTGATAG TGAAACACCA GCAACCCAAC CATCAGCTCA AAATGATGAA CCTATCGAAC TAGTTGTAAC AGGGACAAGA TTTGAAATTC CCATCCAAGA CACTCCGCAA TCAATTCAGG TGATTCCACG TCAAGTGCTG GAAGATAGAG GAGCAGTGCG TTTGGATGAG TTTACCGATA ACGTCAGTGG TGTCCAACGG ATAACAGGTG GAGACGGACT TGGGTCATCA GGCTTTATCA TTCGTGGGTT CTCTGATGTA TATGAAAATC TCCGCAATGG ATTTCGCTCT CAGGGCGGTT TTCCACGCGA TCTGGCCAAT ATTGATCGGG TTGAGGTACT TAAAGGCCCG GCGGCGGCTT TGTATGGTGG TGGTTTTCAG TCAGGTATTG TGAATATTTT GACGAAAAAA CCCCTTGACG AACCACGTTA TGAAGTCAAA GCTACTGTTG GGAGTTACGA CTTTTATCGT GGTGAACTCG ATTTAACAGG CCCATTAGTA GAAAATCGAT CGCTGCTGTA TCGTCTGAAC GTCGCTTATC AAAATCAGGG GAGTTTTCGT GACTTCCTTA ACTACAAAAG CTTTTTTGTC GCGCCATCTT TGACCTGGAA TATCAGCCAA CGTACTAGTC TGAGCTTTGA TTATGAATAT TTCAACACTG ATTACCCCGA TGATGAAACA TTTAGAGCCG AGCCAGAATT TTTGCGAATC TCCCCTAAAA CCTATTTAGG TGAACCAGAT TTAGCCAATG AAAATTTCAC TGCTCATTCA CTCTCACTCG AATTTTCACA TGAGTTTAGT GATAACTGGC AGTATCGATT AGGATTTAAT ACACTTTGGC AAGATGTTTT TGACGAGGGA GCAACTCGTA GTGGTAGACT GCAAGCAGAT CGTCGCACAT TGAATCGGCA GTTCACTAGA CGCACTAACG ATCTGGAAAA TCTGACCCTG AGAAACGAAA TTTTAGGAAA GTTCAATACT GGTTCTGTGC GGCATAATCT ACTCTTTGGG GTGGATTACT CCCGCTTGGA GTATGCCTAT ACCTTCTCTA GTGCGCCGAT CGCTCCCATC GATATCTTTA ATCCAATCTA CGGTGCTAGA CCAACAGCAG CGCTTTCACT GAACTCTAAC GAGGCATACG GTGATGATAC CCTTGGTATT TACCTTCAGG ATATTGTTGA AGTGCTGCCT AGTTTGAAAA TTCTAGCAGG AGTGCGCTTT GATAATGTCA ATGGCTTCTA CGAAAACCGC GAAACAAACA CTAGCATTAA TGAAGTAAGT GATAGTAAGT TTTCACCGAG ACTTGGTATT GTTTATCAGC CAGGCAATAC GACAACACTT TATGCTAGCT GGTCAAACTC ATTCACACCC CAAATCTTTG GTAGAAACTC CAATGGGGAA CAATTTAAAC CTGTGACTTC CGAGCAATAC GAGGTAGGAA TTCGCCAAGA GTTTTTAGAC CAGCGACTGT CAGCAAATCT GGCGCTATTC CAAATTACAC GCCAGAACGT CGCTACCACA GACCCAAACT CCTCTGACCC TTTTGCCAGA ATTCAGACGG GAGAGCAACG TAGTCGTGGG GTTGAATTGG ATATTAATGG GGAAATTTTA CCTGGCTGGA AAATGATTCT GACTTATGCT TATACCGATG CACAGGTGAC AGAGGATAAT CGCATCCCTG TAGGCGATCG CTTACCGAAT GTCCCTTACA ATAGCGCTAG TCTATGGACA ACTTATGAAA TTCAAAGTGG CAATCTGCAA GGATTGGGTG CAGGCTTGGG GATCGTGTAT GTAGGCGATC GCCAGGGTGG ACTGCCTAAT ACAATCACCA TACCTTCATA CGTCCGTACA GATGCAGCAT TATTCTATCG CCGCCGTCAG TTTGAGGCAC GCCTAAACTT CAAAAATCTC TTTGATACTA ATTATTATGA TGCCACTGAT GGCACATCAA TTAATCCCCA AGAGCCATTT ACGCTCATTG GTAGTTTTTC CTACAGATTT TGA
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Protein sequence | MLQLRQFFCV GIAGTIYLIG IGTAKAQNDE NISKIPITNI SQISDIKRPH TNVKEWLAQQ QAQIIQVTGV SLNQTSNGLE VILETTASDK LQTSLNSEGN ILSVDIPNAQ LRLASGDSFL SQKPVAGITE ITVINQDSNT IRVTVIGETS LPKVELDDSE NGLIFVVTPI TTSAQQPQTP QTNQADSETP ATQPSAQNDE PIELVVTGTR FEIPIQDTPQ SIQVIPRQVL EDRGAVRLDE FTDNVSGVQR ITGGDGLGSS GFIIRGFSDV YENLRNGFRS QGGFPRDLAN IDRVEVLKGP AAALYGGGFQ SGIVNILTKK PLDEPRYEVK ATVGSYDFYR GELDLTGPLV ENRSLLYRLN VAYQNQGSFR DFLNYKSFFV APSLTWNISQ RTSLSFDYEY FNTDYPDDET FRAEPEFLRI SPKTYLGEPD LANENFTAHS LSLEFSHEFS DNWQYRLGFN TLWQDVFDEG ATRSGRLQAD RRTLNRQFTR RTNDLENLTL RNEILGKFNT GSVRHNLLFG VDYSRLEYAY TFSSAPIAPI DIFNPIYGAR PTAALSLNSN EAYGDDTLGI YLQDIVEVLP SLKILAGVRF DNVNGFYENR ETNTSINEVS DSKFSPRLGI VYQPGNTTTL YASWSNSFTP QIFGRNSNGE QFKPVTSEQY EVGIRQEFLD QRLSANLALF QITRQNVATT DPNSSDPFAR IQTGEQRSRG VELDINGEIL PGWKMILTYA YTDAQVTEDN RIPVGDRLPN VPYNSASLWT TYEIQSGNLQ GLGAGLGIVY VGDRQGGLPN TITIPSYVRT DAALFYRRRQ FEARLNFKNL FDTNYYDATD GTSINPQEPF TLIGSFSYRF
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