Gene Ava_B0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0212 
Symbol 
ID3677758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp237447 
End bp238076 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content44% 
IMG OID637714919 
ProductABC transporter-like 
Protein accessionYP_320113 
Protein GI75812494 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAGG CTGAACATTT ATCTTTTCGT CACCATTCCC AGCAAAGGTG GATTTTGCAA 
GATTTTAGTT TGGAATTAGC CAAAGGCGAA GTTGTGGGTT TGACTGGGGC GAGTGGTTTG
GGTAAAACCA CAATTGGTAA ACTCCTGGCT GGATATTTAC AACCAACTCA AGGAAAGGTG
ACTTGTGATG GTCAACCCTT ACCCAGCAGC AGTTATTGTC CTGTACAGCT GATTTTTCAA
AACCCTGAAC TAGCTGTTAA TCCACGTTGG CGAATCAGTA AAATTTTAGC AGAAGGACAA
CCGCCTTCAG ATGATTTACT CGCTGCTCTA GGCATTCACC AAAGTTGGCT CAATCGCTAT
CCCCATGAAC TCAGTGGGGG TGAGTTGCAA CGAATTGCAG TGGCGCGATC GCTCAACTCT
CATACTCGCT ACTTGATCGC AGATGAAATG ACAGCAATGC TAGATGCTAA CACTCAAGCT
CTGATTTGGC AGGTAGTGAT TAAATATGCC AAAGAGCATG AAGTGGGAAT TTTAGTCATC
AGTCATGAAG TAGCTTTACT TCAGCGTCTT TGCATTCACA TCATTGATTT GAGTCAACTA
ACTTGGGGTA AATATAGCGG TGCGATGTAG
 
Protein sequence
MLKAEHLSFR HHSQQRWILQ DFSLELAKGE VVGLTGASGL GKTTIGKLLA GYLQPTQGKV 
TCDGQPLPSS SYCPVQLIFQ NPELAVNPRW RISKILAEGQ PPSDDLLAAL GIHQSWLNRY
PHELSGGELQ RIAVARSLNS HTRYLIADEM TAMLDANTQA LIWQVVIKYA KEHEVGILVI
SHEVALLQRL CIHIIDLSQL TWGKYSGAM