Gene Ava_B0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0208 
Symbol 
ID3677754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp232366 
End bp233505 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content43% 
IMG OID637714915 
Productperiplasmic sensor Signal transduction histidine kinase 
Protein accessionYP_320109 
Protein GI75812490 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA CAGCCTCCAT GACCAAAAAT ATATCCTCAA TGCTTCTACT TCCTACGAAA 
CTTCTGACTA AAAACTCACG ATTGAGTAGA TTGCTAGTCA TGTTAGGGCT GTTTGTAACT
GTCGTGCTAA TGGAGTTTAC TACACCTACA GAGTATGTGT TTGGCTACTT TTATACAGGG
CCAATATTAT TGACGAACTC ATGGTTTGGG GGGGCTGCGA CCTTTGGAGC GACGACGATC
GCAGTTTTCT TAACGATTTT AAATATTTTC TTACCAGGGG GTGAAGTTAT TGAAACATCC
ACAGTTGCCA GTCGCGCGAT CGCCGCAATG GCCTTGATTG TAACTGGTGT GTTAAGTGAG
CGCCTGCGTC GTTCCCAAGA AGCGATCACC GTTACCCGTG CCAAATTGGA ATCTCAACAA
GAATTAATCA AACTGCGAGA AGATTTTGCC TCTACACTCA CCCATGATTT AAAAACCCCA
CTTTTGGGAG CAATTGAAAC TATCAAAGCA TTTCAGCAAG AACAATTTGG CTCAGTCTCA
CCCACTCAGC AGGAAGTATT AGACACAATG GCACGCAGCC ACAAGACTTC TCTACAACTT
GTAGAAACTT TGTTAGATGT CTATCGCAAC GATATTGAAG GCTTAAAACT GAACTTAGCA
CCTGTAGATT TGACCAACTT AGCAGAAGAT GTGGCTAGTA GTTTGATTGC ATTAGCTGCC
AATCGTCGCG TTCATCTCTC AGTTAGTTAT GGTAATTCTG ACTGGCGACA CGCATTGTGG
GTTCAAGGTG ATACGCTGCA ACTGCAACGA GTTTTTAATA ACCTTTTAGT GAATGCGATT
AATCATTCCC GGCGCGGCGC AAAGGTAGAA GTAGTTTTAG AAGGGCAAGC TTCTTACCAA
CTGGTGAAGA TTTTAGATAC AGGTGCAGGT ATTCAACCAG AACAGTTCCC TTATTTATTT
GAACGATTTT ATCAAGGACA TAGCGATCGC CAAGCTAAGG GTTCGGGATT GGGTCTTTAC
TTATCTCGCC AAATTATTGA AGCCCACGGA GGTATAATTT GGGCAGAGAA CAGAGTACCC
ACTGGTGCTA TGTTTGCTTT CAAACTGCCC GTTTATCCAT TTCCATCTCT AACTGCGTAA
 
Protein sequence
MELTASMTKN ISSMLLLPTK LLTKNSRLSR LLVMLGLFVT VVLMEFTTPT EYVFGYFYTG 
PILLTNSWFG GAATFGATTI AVFLTILNIF LPGGEVIETS TVASRAIAAM ALIVTGVLSE
RLRRSQEAIT VTRAKLESQQ ELIKLREDFA STLTHDLKTP LLGAIETIKA FQQEQFGSVS
PTQQEVLDTM ARSHKTSLQL VETLLDVYRN DIEGLKLNLA PVDLTNLAED VASSLIALAA
NRRVHLSVSY GNSDWRHALW VQGDTLQLQR VFNNLLVNAI NHSRRGAKVE VVLEGQASYQ
LVKILDTGAG IQPEQFPYLF ERFYQGHSDR QAKGSGLGLY LSRQIIEAHG GIIWAENRVP
TGAMFAFKLP VYPFPSLTA