| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0200 |
|---|
| Symbol | |
|---|
| ID | 3677870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007410 |
|---|
| Strand | - |
|---|
| Start bp | 223174 |
|---|
| End bp | 224775 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637714907 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_320101 |
|---|
| Protein GI | 75812482 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCATC TATTATGGAA AACTCTGGTG TTAAGTCCAG TGGGTTTAGC AACAACTTTG
TTAGTCATAA CTAATGGCAT TGATAGCGTC AAAGCTGATG AAAATCGCAT TTTAGAACAA
GTCAATATTT ACAGCAGTGA AGCGAACAAT CAAAATCCCA TGTCTCAAGT GACATCAGTT
TCCCAGTTTT CTGATGTACA GCCAACGGAT TGGGCATTTC AAGCATTGCA ATCTCTAGTT
GAACGCTATG GTTGTATCGC TGGGTATCCC AATGGAACTT ACCGAGGAAA CCGCGCCTTA
ACCCGTTATG AATTTGCGGC TGGTTTGAAT GCTTGTTTAG ATAGAGTCAA TGAACTAATT
GCGACAGCAA CCTCTGATTT GGTGACAAAA CAAGATTTAG CCACCCTCCA ACGTTTGCAA
GAAGAATTTT CCGCAGAATT AGCCACTTTA CGTGGTCGAG TAGATGCTGT AGAAGCACGT
ACTGCGGAGC TAGAAGCAAA TCAATTTTCT ACTACAACTA AGTTAGTCGG TGAAGCAATT
TTTGCTGTTA CTGATAGCTT TGGCGACGAC GACGACAACA ACACCGTCTT TCAAAACAGG
GTACGTCTAA GTTTGCAAAC CAGCTTCACA GGTAAAGATA TTCTCTACAC CAGGCTTGCT
AGTGGTAATG CGGTGGGATT AACTTTACCA AATGGCACAT TTGAAGGTAC TCAAACTTTT
AACATATCGC CCAATACCAG TAACGGTGTT GCTATAGATT GGCTGTCATA CTATTTCCCC
GTTGGTAATT CCCAAGTATA TATAGCAGCA ACAGGCGGTA TTCACAGCGA TTATGTTCCT
ACTGTTAACC CCTATTTTGA GGATTTTGAC GGTGGTAACG GTGCTTTGTC TACCTTTGCA
TCTGAAAGTC CGATTTATCG CATAGGTGGC GGTGCAGGTG CAGGTGTGAA CTTGGCTTTT
GGTAGTGGGA ACAGTAGTTT TAAACCTTCA TTAACCTTGG GCTATTTAGC TTCCGAAGGG
AATAACCCAA ACCCCAGTGC AGGTTTATTT GAAGGTAATT ATGCCGCTTT AGCACAGTTA
AATCTGAATG TGGGCGATCG CCTCACCTTA GCCGCCACCT ATGTTCATGG GTATCATGGG
GCAAATAGTG CTTTATTTGA TGCTGGCTTG GTAAGTAGTG CTGTAGTCGG GACTGCACAA
GCTAACTTTG TCGGTGGTGG TAATCCCTAT CAAAGTAATT CCTACGGTTT AGCTGCGGCT
TTCAAACCCA GTGACAGACT TTCGATTAGT GGTTTTGTGC TTTACAGCGA TATTACAGAC
TTAGTAGCCA ATAATGATGG TGAAGTTTGG AGCTATGGAG TAGGAGTAGC TCTACCAGAT
TTGGGTAAGA GGGGTAACGT TTTAGGGTTG TTTGCAGGTA CTCAACCGTA CTTGGGGAGT
GTAAGTGGCG ATCGCCCCTA TCACATTGAA GGTTTTTACA AATATCGCCT CACTGACAAC
ATTTCTATCA CCCCTGGTGT GATTTGGTTA ACCAATCCAG GTCAAGTCAC TAACAACAAT
GATGCCGTGA TTGGCACATT AAGAACTACC TTCACTTTTT AA
|
|---|
| Protein sequence | MSHLLWKTLV LSPVGLATTL LVITNGIDSV KADENRILEQ VNIYSSEANN QNPMSQVTSV
SQFSDVQPTD WAFQALQSLV ERYGCIAGYP NGTYRGNRAL TRYEFAAGLN ACLDRVNELI
ATATSDLVTK QDLATLQRLQ EEFSAELATL RGRVDAVEAR TAELEANQFS TTTKLVGEAI
FAVTDSFGDD DDNNTVFQNR VRLSLQTSFT GKDILYTRLA SGNAVGLTLP NGTFEGTQTF
NISPNTSNGV AIDWLSYYFP VGNSQVYIAA TGGIHSDYVP TVNPYFEDFD GGNGALSTFA
SESPIYRIGG GAGAGVNLAF GSGNSSFKPS LTLGYLASEG NNPNPSAGLF EGNYAALAQL
NLNVGDRLTL AATYVHGYHG ANSALFDAGL VSSAVVGTAQ ANFVGGGNPY QSNSYGLAAA
FKPSDRLSIS GFVLYSDITD LVANNDGEVW SYGVGVALPD LGKRGNVLGL FAGTQPYLGS
VSGDRPYHIE GFYKYRLTDN ISITPGVIWL TNPGQVTNNN DAVIGTLRTT FTF
|
|---|
| |