Gene Ava_B0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0197 
Symbol 
ID3677867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp219366 
End bp220556 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content40% 
IMG OID637714904 
Productosmosensitive K+ channel histidine kinase sensor subunit 
Protein accessionYP_320098 
Protein GI75812479 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.960003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAACC CCTTGCCGAT TTCAGCCAAT AGTACCTATA CTCATCCTTC CCGTTATGGC 
AAACATAAAA TCCTTCTTGG TATGGCTCCT GGTGTGGGCA AAACCTATAG GATGTTGGAT
GAAGCCAACC GACTCAAACA ACAAGGTAAA GATGTAGTTA TCGGCTACTT GGAAACTCAC
GGGCGCATAG ATATAGCTGC CAAAGCTATT GGCTTGGAGA TAATTCCTCG CAAAATTGTA
CAACAGGGTG AATTAATACT CACTCAAATG GATACAGATG CCATCCTTGC GCGTCAACCT
CAGCTAGTTC TAATTGATGA ACTAGCGCAC ACCAACATCC CTGAATCTGG TCGAGACAGA
CGCTACCAAG ATGTGGAAGC AATAGTGAAA GCAGGTATAG ATGTTTACTC TACAGTTAAC
ATTCAACACT TGGAAAAATT CAGCAATCTA GTTACCCAAA TGACGGGAAT TGTTGAGCAA
GAGTGTATTC CTGATTATTT ATTAGAAGTC GCCAACGAAG TGGTGGTAGT AGATGTCACA
CCTGAAACCT TAGAAGAAAG ATTATTGGAT GGAAAGATTT ATCCACTGGA TAAAATTGAG
CGATCGCTGC AACAATTATT CCAGCATCGT AATTTGGTAC TATTACGAGA ACTGGTACTG
CGAGAACTAG CTGATAAGAT TGAGCAAAAA GCAATCAAAG AAGCAGGTTA TACTTCACTT
GCACAAGCTT GCTGCGTACA CGAACGCATA CTAGTTTGTG TTTCCACCCA GCCACACTCC
CTGCAACTAA TTGATAAAGG AGCCAAAATG GCCGATTGTA TGAAGGCTCC ACTTTATGTT
TTATTTGTTA GCGATCCCCA GCATTTTTTA ACAAAAGAAG AAGAACTTCA TATTCAAAGC
TGTAAAAATC TTTGTCAAAA GTTTAATGGT GAGTTCGTGC AAGAATCCAG TCATAACGTT
GCCGAAAAAA TTGCTCAGGT TGCAGATTTT TACAGAATTA CACAAATAGT TTTGGGTCAA
TCTTGTCACA GTCGCTGGCA GAAAATTTTT AGAGGATCTT TGATTAGCCA ACTGATGCAT
ATATTAGCTC ACCGACTACC CAATGCTGCA ATCCACAACT CCAATAGTAA ACAAGCGATT
TGCGATCGGA CATCGTTTTC CCAAATCGAC TTTCATCTAA TCTCAATTTA A
 
Protein sequence
MSNPLPISAN STYTHPSRYG KHKILLGMAP GVGKTYRMLD EANRLKQQGK DVVIGYLETH 
GRIDIAAKAI GLEIIPRKIV QQGELILTQM DTDAILARQP QLVLIDELAH TNIPESGRDR
RYQDVEAIVK AGIDVYSTVN IQHLEKFSNL VTQMTGIVEQ ECIPDYLLEV ANEVVVVDVT
PETLEERLLD GKIYPLDKIE RSLQQLFQHR NLVLLRELVL RELADKIEQK AIKEAGYTSL
AQACCVHERI LVCVSTQPHS LQLIDKGAKM ADCMKAPLYV LFVSDPQHFL TKEEELHIQS
CKNLCQKFNG EFVQESSHNV AEKIAQVADF YRITQIVLGQ SCHSRWQKIF RGSLISQLMH
ILAHRLPNAA IHNSNSKQAI CDRTSFSQID FHLISI