Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0197 |
Symbol | |
ID | 3677867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 219366 |
End bp | 220556 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637714904 |
Product | osmosensitive K+ channel histidine kinase sensor subunit |
Protein accession | YP_320098 |
Protein GI | 75812479 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.960003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAACC CCTTGCCGAT TTCAGCCAAT AGTACCTATA CTCATCCTTC CCGTTATGGC AAACATAAAA TCCTTCTTGG TATGGCTCCT GGTGTGGGCA AAACCTATAG GATGTTGGAT GAAGCCAACC GACTCAAACA ACAAGGTAAA GATGTAGTTA TCGGCTACTT GGAAACTCAC GGGCGCATAG ATATAGCTGC CAAAGCTATT GGCTTGGAGA TAATTCCTCG CAAAATTGTA CAACAGGGTG AATTAATACT CACTCAAATG GATACAGATG CCATCCTTGC GCGTCAACCT CAGCTAGTTC TAATTGATGA ACTAGCGCAC ACCAACATCC CTGAATCTGG TCGAGACAGA CGCTACCAAG ATGTGGAAGC AATAGTGAAA GCAGGTATAG ATGTTTACTC TACAGTTAAC ATTCAACACT TGGAAAAATT CAGCAATCTA GTTACCCAAA TGACGGGAAT TGTTGAGCAA GAGTGTATTC CTGATTATTT ATTAGAAGTC GCCAACGAAG TGGTGGTAGT AGATGTCACA CCTGAAACCT TAGAAGAAAG ATTATTGGAT GGAAAGATTT ATCCACTGGA TAAAATTGAG CGATCGCTGC AACAATTATT CCAGCATCGT AATTTGGTAC TATTACGAGA ACTGGTACTG CGAGAACTAG CTGATAAGAT TGAGCAAAAA GCAATCAAAG AAGCAGGTTA TACTTCACTT GCACAAGCTT GCTGCGTACA CGAACGCATA CTAGTTTGTG TTTCCACCCA GCCACACTCC CTGCAACTAA TTGATAAAGG AGCCAAAATG GCCGATTGTA TGAAGGCTCC ACTTTATGTT TTATTTGTTA GCGATCCCCA GCATTTTTTA ACAAAAGAAG AAGAACTTCA TATTCAAAGC TGTAAAAATC TTTGTCAAAA GTTTAATGGT GAGTTCGTGC AAGAATCCAG TCATAACGTT GCCGAAAAAA TTGCTCAGGT TGCAGATTTT TACAGAATTA CACAAATAGT TTTGGGTCAA TCTTGTCACA GTCGCTGGCA GAAAATTTTT AGAGGATCTT TGATTAGCCA ACTGATGCAT ATATTAGCTC ACCGACTACC CAATGCTGCA ATCCACAACT CCAATAGTAA ACAAGCGATT TGCGATCGGA CATCGTTTTC CCAAATCGAC TTTCATCTAA TCTCAATTTA A
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Protein sequence | MSNPLPISAN STYTHPSRYG KHKILLGMAP GVGKTYRMLD EANRLKQQGK DVVIGYLETH GRIDIAAKAI GLEIIPRKIV QQGELILTQM DTDAILARQP QLVLIDELAH TNIPESGRDR RYQDVEAIVK AGIDVYSTVN IQHLEKFSNL VTQMTGIVEQ ECIPDYLLEV ANEVVVVDVT PETLEERLLD GKIYPLDKIE RSLQQLFQHR NLVLLRELVL RELADKIEQK AIKEAGYTSL AQACCVHERI LVCVSTQPHS LQLIDKGAKM ADCMKAPLYV LFVSDPQHFL TKEEELHIQS CKNLCQKFNG EFVQESSHNV AEKIAQVADF YRITQIVLGQ SCHSRWQKIF RGSLISQLMH ILAHRLPNAA IHNSNSKQAI CDRTSFSQID FHLISI
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