| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0185 |
|---|
| Symbol | |
|---|
| ID | 3677689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007410 |
|---|
| Strand | - |
|---|
| Start bp | 207253 |
|---|
| End bp | 209808 |
|---|
| Gene Length | 2556 bp |
|---|
| Protein Length | 851 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637714892 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_320086 |
|---|
| Protein GI | 75812467 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTGTG GGGCAGCCTT GAAACTAAAT CAGTATATCT ATCTAGGTAT AGCAAGTACG
ATTTGCTTGC TGATAACTCA GAAAGCAAAT GCACAAGAGA AGCCGATAAA CACAAAGGAT
ATTGGATTAA TTACAAATAT TCCTCGACTG AGTGATATTG AGCGTCCACA AACGAGTGTT
AGAGATTGGC TAGCACAGTC AGCACCAACC CCTCCACAAA TCAAGATTAC TGGTGTGCGA
ATCAATCGCA CAGACGATAC TTTCGAGCTA ATTCTGGAAA CTCCAGATGG AGAAATATCT
GCACCAGAAA CTCTTCAAGA AGGCAATATA TTTATTGCAG ATATCCCCAA TGCAATACTA
GCTTTACCAG AAGGACGGGA ATTTCGGGAA GACACACCAG TTGATGGTAT TTCTTATGTG
ACGGTAACAC AGGAGGAATC TAACAACACG GTGCGTGTAA CGATCGCATC CCCAGGAAAT
CTACCAACAA TCCAGGTGGT GAATCAATCC AATAATTTAA CGATCGCCGT TACTCCTACT
TCCCCAGATA TTGAATTGAT AGTAACCGCC CAAAAACGCC CCGAAGACGC GCAAGATGTC
CCCCTTAGCT TGACGGTAAT TCCTCAACAA GAAATCGAAG ACGCTCAAAT TCGTTCTTTC
CAAGATATCG CCAACAACAC ACCCAACTTT AGTTTTCTCC CCACCACTGC GGGGAGTGCT
GATTTTGGTT ACTACAGTGT GCGGGGGTTA AATAACTTTA ACTTTTTAGC CAATCAAGAC
ACCGTTGGCT TTTACATTGA TGATGTTCCC TTCGATTATG GCGGCTTTTT AGATGTTGGT
TTGATTGATT TAGCACGGGT AGAAGTTTTG CGAGGCCCCC AAAGTACCCT CTATGGTAGA
AGTAGTCCGG CTGGGGTGGT GAATGTAATT TCTCGCCCGC CAAGCAATCA GCCAGAGATG
CAAATTAGCG CCCTTTACGG TAGCTATAAC AGCCGGGAAT TGCAATTATC CCTCAGTGAT
GCCATTATTC CCGATAAACT GGCATTTCGA CTAGCAGGCG CATACAACGC ACGAGATGGC
GTATTTGACA ATATCTTTCT GAATAAGCCA ATCGGAGAGC GATCGCAACT CACAGGACGC
GCTCAAATTC TCTGGACACC CACACCAGAG TGGAATATAT CGTTTAACGC CTATGCCAGT
GACAACGATA ATGGCAATCC TACCTTTTCT CGACAAAACG CACAAAACCC TTTTCAAGTT
TCCCAAGAAG TTGATGGTTT CAATCGCCTC AGCACTAATA CCCAGGCGCT AAAAATTAGC
TACAACGGCA ATGGATTTCG GGCTACGTCT ATTACCAGCA GGCGATTTAG CAATCAAAAT
ACCTTGGTGG GTGACAATTT CCCCGGTGAT TTGCTACAGC AAATTATTGG TATCAATTCG
ACCCTGTGGT CACAGGAATT TCGCCTCCAA TCCCCTGAAA GTGCCGACCG TTTGCGGTGG
TTGCTTGGTG GATATTACGA GTCACGGAAT TTTAATGTTC TAGATGACAC CTTTAAATAT
ACTGATGCTG GTGCAGTAGC CTTTGGCGTA CCAGCCCCAG GAAGCGATCG CGTTTCCGCA
GAACAAAATC GTCAAACCTA CGCCATATTT GGACAAATTG ACTACAAACC AATTGCACCA
CTAACTTTGT TTGCAGGTTG GCGCTATGAA ACTGCTGACG CTGAACTCGA CCGTCGCCGT
GTTTTTGTCA ATCCTGATGG TACAGTCAAT CCACCCACCG CAGAAGTACG CAATGCTACC
CTTAATAGTG ACGCATTTAT CCCCCGCTTT GGCTTACAGT ATCGCTTCAA TCCCAATTTA
ATGGCTTACG CCACAATAGC TAAAGGCTAC AGACCAAGTG GATTTAACTA CCGTGCAGAT
ACAGAAGATA CACGCCGATT TCAAGAAGAA ACCACCTGGA CTTACGAAGT AGGCTTAAAA
TCTTCTTGGT TAGATGACCG ACTGAGTGCA AATCTATCTA TTTTTCAAAG CGATGTTGAT
AACTACCAAG TGCTGCTGAC CGATGATTTT GGCTTTTTTA GAAACGTTAC CAATGCAAAT
GTCAAAGTCA CAGGTTTAGA ATTTGAACTC AAAGCCAAGC CTTTACAAGG ACTAGATTTA
ATTGCTGGTA TTGGCTACGT GGACAGCAAA TTTAAAAACT ATAGAAATCC TTTCACAAAT
GGAGACTTTA GCAATAACCG CGTTCCTTTC GCACCGGAAT TAACCTACAA TTTAGCCGTT
CAATATCGTA GTCCCGGTGG TATTTTTGCC CGTGCAGAAT TGCGCGGTTA TGGAATAACT
TACTTTGATG ATGCTAACCA AGTGAAGCAA GACCCCTATG CACTAGTAAA TGCCCGGATT
GGTTATGAGG GCGAAAAATA TGGCATTTAT CTATATGCAA ATAACTTGTT TGATACTCGT
TATATTACCT CTGGTTTCCT ATTCCCACCA CCTAATGTAA CTGCGGGATT TGGCGACCCG
GTAACTTATG GTGTGCGAGT AAGTGCGAGT TTTTAA
|
|---|
| Protein sequence | MECGAALKLN QYIYLGIAST ICLLITQKAN AQEKPINTKD IGLITNIPRL SDIERPQTSV
RDWLAQSAPT PPQIKITGVR INRTDDTFEL ILETPDGEIS APETLQEGNI FIADIPNAIL
ALPEGREFRE DTPVDGISYV TVTQEESNNT VRVTIASPGN LPTIQVVNQS NNLTIAVTPT
SPDIELIVTA QKRPEDAQDV PLSLTVIPQQ EIEDAQIRSF QDIANNTPNF SFLPTTAGSA
DFGYYSVRGL NNFNFLANQD TVGFYIDDVP FDYGGFLDVG LIDLARVEVL RGPQSTLYGR
SSPAGVVNVI SRPPSNQPEM QISALYGSYN SRELQLSLSD AIIPDKLAFR LAGAYNARDG
VFDNIFLNKP IGERSQLTGR AQILWTPTPE WNISFNAYAS DNDNGNPTFS RQNAQNPFQV
SQEVDGFNRL STNTQALKIS YNGNGFRATS ITSRRFSNQN TLVGDNFPGD LLQQIIGINS
TLWSQEFRLQ SPESADRLRW LLGGYYESRN FNVLDDTFKY TDAGAVAFGV PAPGSDRVSA
EQNRQTYAIF GQIDYKPIAP LTLFAGWRYE TADAELDRRR VFVNPDGTVN PPTAEVRNAT
LNSDAFIPRF GLQYRFNPNL MAYATIAKGY RPSGFNYRAD TEDTRRFQEE TTWTYEVGLK
SSWLDDRLSA NLSIFQSDVD NYQVLLTDDF GFFRNVTNAN VKVTGLEFEL KAKPLQGLDL
IAGIGYVDSK FKNYRNPFTN GDFSNNRVPF APELTYNLAV QYRSPGGIFA RAELRGYGIT
YFDDANQVKQ DPYALVNARI GYEGEKYGIY LYANNLFDTR YITSGFLFPP PNVTAGFGDP
VTYGVRVSAS F
|
|---|
| |