Gene Ava_B0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0179 
Symbol 
ID3677907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp201998 
End bp202894 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content46% 
IMG OID637714886 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_320080 
Protein GI75812461 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC GGAATATCTT GATTTTAATT GGCTGTGCGA TCGCCCTCAC AGGTGCAAGC 
CTCTGGATGG GAGAACAAGC CTATTCCTGG TTCCCCCCCC AAGCCGCCGC CGAATCCAAA
CTTATAGATG AACTATTTAG CTTTTTAGTC ACCTTGGGAA CCTTCATTTT CCTGGGCGTA
ACTGGAACCG TCATCTATTC CATAATTTTT CATCGCGCAG GTAAATATGA CACCAGCGAT
GGCCCCCCAA TTGAAGGGAA TATCACCTTA GAAGTAGTTT GGACAACAAT TCCCATTCTC
TTAGTGCTGT GGATTGCTAC CTACAGCTAC AACATCTATG CAGAAATGGC AATTCAAGGG
CCGATGGAAG CCATGCACAT ACATACAATG GCATCAGCCC ATGCAGCAAC AATGGAATCT
ACAACCGAAC CCGTTGAAAA AATAGAAGTC CTTGCCAAAC AATGGGCTTG GGTTTTCCGC
TACCCCAATC AAAACGTTAC CAGCACCGAA TTACATTTAC CAGTTAATCG ACGCATTAGT
TTAGCACTCC AATCAGCAGA TGTTCTCCAC GGCTTTTACA TTCCCGCCTT TCGACTAAAA
CAAGACATAG TACCCAAACA AACCATCGAC TTTGAATTTA CCCCCATTCG CCCAGGTAAA
TATCGACTGC GCGACTCCCA ATTTAGCGGT ACTTACTTTG CAGCCATGCA AACTGATGTA
GTAGTCGAAT CAATAGAAGA TTACAACCAC TGGCTGAAAT TAGCCGCAAC CCAAAAACCC
GTCCCAGCCA ATAATCAAGC CGCTAACGAA TACGCCCAAA AAATCAAAGG CGGATTCACC
ACAGGCTATC CCACAGTCGT ACCCGCACCA CCGCCTCTAG TCAACTTCCC CTCTTAA
 
Protein sequence
MKIRNILILI GCAIALTGAS LWMGEQAYSW FPPQAAAESK LIDELFSFLV TLGTFIFLGV 
TGTVIYSIIF HRAGKYDTSD GPPIEGNITL EVVWTTIPIL LVLWIATYSY NIYAEMAIQG
PMEAMHIHTM ASAHAATMES TTEPVEKIEV LAKQWAWVFR YPNQNVTSTE LHLPVNRRIS
LALQSADVLH GFYIPAFRLK QDIVPKQTID FEFTPIRPGK YRLRDSQFSG TYFAAMQTDV
VVESIEDYNH WLKLAATQKP VPANNQAANE YAQKIKGGFT TGYPTVVPAP PPLVNFPS