Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0176 |
Symbol | |
ID | 3677904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | - |
Start bp | 197890 |
End bp | 199440 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637714883 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_320077 |
Protein GI | 75812458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.326869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATTG ACGATCAACA CTACGATATT ATCATCGTTG GCACCGGTGC TGGTGGCGGT ACATTAGCAT ATAAACTCGC CCCAACAGGC AAAAAAATCC TCATTCTAGA ACGCAGCAAT TTTCTCCCCA AAGAAGAAGA AAACTGGAGT GCTGTTGAAG TCTTTAAAAA AGAACGTTAT CACACTCAAG AACAATGGTA CGACAGCACT GGCGAACCTT TTCGTCCCCA AATTAACTAT TGGGTAGGTG GAAATACAAA AGTATATGGT GCTGCACTGT TGCGGATGCG GGAACGAGAT TTTCAAGAGG TTAAACATCA AGATGGGGTT TCAATTGAGT GGCCTTTGAC ATACCAAGAC TTTGAACCCT ATTACACCGA AGCGGAAAAA CTCTACCATG TCCACGGTAA ATCAGGCGAT GACCCAACAG AACCACCCCG CAGCGAACCT TATCCTTATG CAGAAGTAAG TCACGAAGCG CGGATGCAAA CAATTGCTGA TGCTATCTCC CAACAAGGGC TACATCCAAC ACATTTACCT TTAGCACTCA AGAGTGATTG TATCCGATGT CATACTTGTG ATGGTTTCCC TTGTAAAATA GATGCCAAAG CTGATGCTCA TACTGTGGGA ATTAACCCAG CTTTGTCACA TTCTAACGTC ACCTTAAAAA CCTCAGCTAA GGTTGTGCGT TTACACACTA ATCCATCTGG TATGGAAGTA AAAGCTGTGG AAGCAGAAAT TGATGGACAA TCCTATCTAT TTTTTGCAGA TATCGTAGTT CTAGCTTGTG GTGCGGTAAA TTCGGCGGCG TTGCTGTTAC GTTCAGTTAA TGACAAACAC CCAAAGGGAC TTGCTAATAG TTCCGATTTG GTGGGACGTA ATTTTATGAA ACACCTGATG ACGGCGATGG TGCAACTAAG TCCGACACCA AACCCGACTG TGTTTCAGAA AACAATTGCT GTGAATGATT TTTATTGGGG AGAATTAGAT TTTCCTTTCC CGATGGGTCA TATTCAAAAT ACAGGTAGTA TTCTGCAAGA AATGATTCCG TCCGAAGCAT CGCCTTTGTT ATCGCTGATG TCGAGGTTAG TACCTGGGTT TGGAATGCGA CAGTTAGCCA ATCATTCTAT TGGTTGGTGG TTACAAACGG AAGATTTACC TAACCCGAAA AATCGGGTGC GGGTTGTGGG TGATAAGTTG TATTTGGATT ATACGCCTAA TAATATCGAG GCACACGATC GCCTAATTTA TCGCTGGACT GATGTGCTAA AAGCTGTAGA TCGCAGTTCG GAAAACCCGG TGTTTCGTCG CGGTATTTAT CCCCGTAGTG ATAGCCCGAT TCAAGTTGTG GCGAATCAAT GCGGTACTTG TCGGTTTGGG GAAGATGCAG CTACATCTGT GCTTGACATT GATTGTCGCA CCCATGATGT GAATAATCTC TATGTTGTTG ATGGTAGCTT CTTCCCTTCT AACTCTGGGG TAAGTCCGGC TTTAACTATT ATTGCCAATG CGTTGCGAGT TGGCGATCGC TTGATTGCAC GCTTGCATTA A
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Protein sequence | MIIDDQHYDI IIVGTGAGGG TLAYKLAPTG KKILILERSN FLPKEEENWS AVEVFKKERY HTQEQWYDST GEPFRPQINY WVGGNTKVYG AALLRMRERD FQEVKHQDGV SIEWPLTYQD FEPYYTEAEK LYHVHGKSGD DPTEPPRSEP YPYAEVSHEA RMQTIADAIS QQGLHPTHLP LALKSDCIRC HTCDGFPCKI DAKADAHTVG INPALSHSNV TLKTSAKVVR LHTNPSGMEV KAVEAEIDGQ SYLFFADIVV LACGAVNSAA LLLRSVNDKH PKGLANSSDL VGRNFMKHLM TAMVQLSPTP NPTVFQKTIA VNDFYWGELD FPFPMGHIQN TGSILQEMIP SEASPLLSLM SRLVPGFGMR QLANHSIGWW LQTEDLPNPK NRVRVVGDKL YLDYTPNNIE AHDRLIYRWT DVLKAVDRSS ENPVFRRGIY PRSDSPIQVV ANQCGTCRFG EDAATSVLDI DCRTHDVNNL YVVDGSFFPS NSGVSPALTI IANALRVGDR LIARLH
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