Gene Ava_B0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0176 
Symbol 
ID3677904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp197890 
End bp199440 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content44% 
IMG OID637714883 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_320077 
Protein GI75812458 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.326869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTG ACGATCAACA CTACGATATT ATCATCGTTG GCACCGGTGC TGGTGGCGGT 
ACATTAGCAT ATAAACTCGC CCCAACAGGC AAAAAAATCC TCATTCTAGA ACGCAGCAAT
TTTCTCCCCA AAGAAGAAGA AAACTGGAGT GCTGTTGAAG TCTTTAAAAA AGAACGTTAT
CACACTCAAG AACAATGGTA CGACAGCACT GGCGAACCTT TTCGTCCCCA AATTAACTAT
TGGGTAGGTG GAAATACAAA AGTATATGGT GCTGCACTGT TGCGGATGCG GGAACGAGAT
TTTCAAGAGG TTAAACATCA AGATGGGGTT TCAATTGAGT GGCCTTTGAC ATACCAAGAC
TTTGAACCCT ATTACACCGA AGCGGAAAAA CTCTACCATG TCCACGGTAA ATCAGGCGAT
GACCCAACAG AACCACCCCG CAGCGAACCT TATCCTTATG CAGAAGTAAG TCACGAAGCG
CGGATGCAAA CAATTGCTGA TGCTATCTCC CAACAAGGGC TACATCCAAC ACATTTACCT
TTAGCACTCA AGAGTGATTG TATCCGATGT CATACTTGTG ATGGTTTCCC TTGTAAAATA
GATGCCAAAG CTGATGCTCA TACTGTGGGA ATTAACCCAG CTTTGTCACA TTCTAACGTC
ACCTTAAAAA CCTCAGCTAA GGTTGTGCGT TTACACACTA ATCCATCTGG TATGGAAGTA
AAAGCTGTGG AAGCAGAAAT TGATGGACAA TCCTATCTAT TTTTTGCAGA TATCGTAGTT
CTAGCTTGTG GTGCGGTAAA TTCGGCGGCG TTGCTGTTAC GTTCAGTTAA TGACAAACAC
CCAAAGGGAC TTGCTAATAG TTCCGATTTG GTGGGACGTA ATTTTATGAA ACACCTGATG
ACGGCGATGG TGCAACTAAG TCCGACACCA AACCCGACTG TGTTTCAGAA AACAATTGCT
GTGAATGATT TTTATTGGGG AGAATTAGAT TTTCCTTTCC CGATGGGTCA TATTCAAAAT
ACAGGTAGTA TTCTGCAAGA AATGATTCCG TCCGAAGCAT CGCCTTTGTT ATCGCTGATG
TCGAGGTTAG TACCTGGGTT TGGAATGCGA CAGTTAGCCA ATCATTCTAT TGGTTGGTGG
TTACAAACGG AAGATTTACC TAACCCGAAA AATCGGGTGC GGGTTGTGGG TGATAAGTTG
TATTTGGATT ATACGCCTAA TAATATCGAG GCACACGATC GCCTAATTTA TCGCTGGACT
GATGTGCTAA AAGCTGTAGA TCGCAGTTCG GAAAACCCGG TGTTTCGTCG CGGTATTTAT
CCCCGTAGTG ATAGCCCGAT TCAAGTTGTG GCGAATCAAT GCGGTACTTG TCGGTTTGGG
GAAGATGCAG CTACATCTGT GCTTGACATT GATTGTCGCA CCCATGATGT GAATAATCTC
TATGTTGTTG ATGGTAGCTT CTTCCCTTCT AACTCTGGGG TAAGTCCGGC TTTAACTATT
ATTGCCAATG CGTTGCGAGT TGGCGATCGC TTGATTGCAC GCTTGCATTA A
 
Protein sequence
MIIDDQHYDI IIVGTGAGGG TLAYKLAPTG KKILILERSN FLPKEEENWS AVEVFKKERY 
HTQEQWYDST GEPFRPQINY WVGGNTKVYG AALLRMRERD FQEVKHQDGV SIEWPLTYQD
FEPYYTEAEK LYHVHGKSGD DPTEPPRSEP YPYAEVSHEA RMQTIADAIS QQGLHPTHLP
LALKSDCIRC HTCDGFPCKI DAKADAHTVG INPALSHSNV TLKTSAKVVR LHTNPSGMEV
KAVEAEIDGQ SYLFFADIVV LACGAVNSAA LLLRSVNDKH PKGLANSSDL VGRNFMKHLM
TAMVQLSPTP NPTVFQKTIA VNDFYWGELD FPFPMGHIQN TGSILQEMIP SEASPLLSLM
SRLVPGFGMR QLANHSIGWW LQTEDLPNPK NRVRVVGDKL YLDYTPNNIE AHDRLIYRWT
DVLKAVDRSS ENPVFRRGIY PRSDSPIQVV ANQCGTCRFG EDAATSVLDI DCRTHDVNNL
YVVDGSFFPS NSGVSPALTI IANALRVGDR LIARLH